BLASTX nr result

ID: Scutellaria22_contig00035024 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00035024
         (301 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI17752.3| unnamed protein product [Vitis vinifera]              169   2e-40
ref|XP_003598903.1| Pentatricopeptide repeat-containing protein ...   154   5e-36
ref|XP_002304774.1| predicted protein [Populus trichocarpa] gi|2...   153   1e-35
ref|XP_004140286.1| PREDICTED: pentatricopeptide repeat-containi...   150   1e-34
ref|XP_003555182.1| PREDICTED: pentatricopeptide repeat-containi...   147   7e-34

>emb|CBI17752.3| unnamed protein product [Vitis vinifera]
          Length = 729

 Score =  169 bits (428), Expect = 2e-40
 Identities = 80/100 (80%), Positives = 91/100 (91%)
 Frame = +1

Query: 1   VFLYNRIIDSLVKTNHLDLAMSVYNDFKEDGLVEENMTYMILIKGLCKAGQMDQVFDLLD 180
           VFLYNRI+D LVKT HLDLAMSVY DFKEDGLVEE++TYMIL+KGLCKAG++D+V +LLD
Sbjct: 222 VFLYNRIMDGLVKTGHLDLAMSVYEDFKEDGLVEESVTYMILVKGLCKAGRIDEVLELLD 281

Query: 181 QMRKNRSKPDVFAYTAMIKVLVSEGNLDGCLIVWEEMEKD 300
           +MR N  KPDVFAYTAM+KVLV+EGNLDGCL VWEEM KD
Sbjct: 282 RMRGNLCKPDVFAYTAMVKVLVAEGNLDGCLRVWEEMRKD 321


>ref|XP_003598903.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355487951|gb|AES69154.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 767

 Score =  154 bits (390), Expect = 5e-36
 Identities = 68/100 (68%), Positives = 91/100 (91%)
 Frame = +1

Query: 1   VFLYNRIIDSLVKTNHLDLAMSVYNDFKEDGLVEENMTYMILIKGLCKAGQMDQVFDLLD 180
           VFLYNRI+D+LVKT HLDLA+SVYNDF+EDGLVEE++T+MILIKGLCK G++D++ ++L 
Sbjct: 225 VFLYNRIMDALVKTGHLDLALSVYNDFREDGLVEESVTFMILIKGLCKGGKIDEMLEVLG 284

Query: 181 QMRKNRSKPDVFAYTAMIKVLVSEGNLDGCLIVWEEMEKD 300
           +MR+   KPDVFAYTA+++++V EGNLDGCL VW+EM++D
Sbjct: 285 RMREKLCKPDVFAYTALVRIMVKEGNLDGCLRVWKEMKRD 324


>ref|XP_002304774.1| predicted protein [Populus trichocarpa] gi|222842206|gb|EEE79753.1|
           predicted protein [Populus trichocarpa]
          Length = 728

 Score =  153 bits (387), Expect = 1e-35
 Identities = 69/100 (69%), Positives = 88/100 (88%)
 Frame = +1

Query: 1   VFLYNRIIDSLVKTNHLDLAMSVYNDFKEDGLVEENMTYMILIKGLCKAGQMDQVFDLLD 180
           VFLYNRI+DSL+KT HLDLA+SVY DF+ DGLVEE++TYMILIKGLCKAG+++++ ++L 
Sbjct: 230 VFLYNRIMDSLIKTGHLDLALSVYEDFRRDGLVEESVTYMILIKGLCKAGRIEEMMEVLG 289

Query: 181 QMRKNRSKPDVFAYTAMIKVLVSEGNLDGCLIVWEEMEKD 300
           +MR+N  KPDVFAYTAM++ L  EGNLD CL VWEEM++D
Sbjct: 290 RMRENLCKPDVFAYTAMVRALAGEGNLDACLRVWEEMKRD 329



 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 24/87 (27%), Positives = 49/87 (56%)
 Frame = +1

Query: 1   VFLYNRIIDSLVKTNHLDLAMSVYNDFKEDGLVEENMTYMILIKGLCKAGQMDQVFDLLD 180
           VF Y  ++ +L    +LD  + V+ + K DG+  + M Y+ L+  LCK G++D+ +++  
Sbjct: 300 VFAYTAMVRALAGEGNLDACLRVWEEMKRDGVEPDVMAYVTLVTALCKGGRVDKGYEVFK 359

Query: 181 QMRKNRSKPDVFAYTAMIKVLVSEGNL 261
           +M+  R   D   Y  +++  V++G +
Sbjct: 360 EMKGRRILIDRGIYGILVEAFVADGKI 386


>ref|XP_004140286.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20740-like [Cucumis sativus]
           gi|449531474|ref|XP_004172711.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At4g20740-like [Cucumis sativus]
          Length = 726

 Score =  150 bits (378), Expect = 1e-34
 Identities = 69/100 (69%), Positives = 89/100 (89%)
 Frame = +1

Query: 1   VFLYNRIIDSLVKTNHLDLAMSVYNDFKEDGLVEENMTYMILIKGLCKAGQMDQVFDLLD 180
           VFLYNRI+D+LVKT+HLDLA++VY DF+E+GLVEE++T+MILIKGLCKAG++D++ +LL 
Sbjct: 227 VFLYNRILDALVKTDHLDLALTVYRDFQENGLVEESVTFMILIKGLCKAGRVDEMLELLA 286

Query: 181 QMRKNRSKPDVFAYTAMIKVLVSEGNLDGCLIVWEEMEKD 300
           +MR N  KPDVFAYTAM+KVL S+ NL+GCL VW+EM  D
Sbjct: 287 RMRANLCKPDVFAYTAMVKVLASKDNLEGCLRVWDEMRAD 326


>ref|XP_003555182.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20740-like [Glycine max]
          Length = 733

 Score =  147 bits (372), Expect = 7e-34
 Identities = 64/100 (64%), Positives = 88/100 (88%)
 Frame = +1

Query: 1   VFLYNRIIDSLVKTNHLDLAMSVYNDFKEDGLVEENMTYMILIKGLCKAGQMDQVFDLLD 180
           VFLYNR++D+LV+T HLDLA+SVY+D KEDGLVEE++T+M+L+KGLCK G++D++ ++L 
Sbjct: 235 VFLYNRVMDALVRTGHLDLALSVYDDLKEDGLVEESVTFMVLVKGLCKCGRIDEMLEVLG 294

Query: 181 QMRKNRSKPDVFAYTAMIKVLVSEGNLDGCLIVWEEMEKD 300
           +MR+   KPDVFAYTA++K+LV  GNLD CL VWEEM++D
Sbjct: 295 RMRERLCKPDVFAYTALVKILVPAGNLDACLRVWEEMKRD 334


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