BLASTX nr result

ID: Scutellaria22_contig00034795 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00034795
         (250 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270253.1| PREDICTED: putative pentatricopeptide repeat...   110   2e-22
emb|CAN71434.1| hypothetical protein VITISV_010168 [Vitis vinifera]   110   2e-22
ref|XP_004142304.1| PREDICTED: putative pentatricopeptide repeat...   109   3e-22
ref|XP_002534039.1| pentatricopeptide repeat-containing protein,...   101   5e-20
ref|XP_002307160.1| predicted protein [Populus trichocarpa] gi|2...   101   7e-20

>ref|XP_002270253.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g08310, mitochondrial [Vitis vinifera]
           gi|296085293|emb|CBI29025.3| unnamed protein product
           [Vitis vinifera]
          Length = 854

 Score =  110 bits (274), Expect = 2e-22
 Identities = 50/83 (60%), Positives = 64/83 (77%)
 Frame = -2

Query: 249 LGLFHDMKQCGCSRSVVLFNNLIQCLSNADSLNECFDLLNEMKETGLQPTHFTFNCIFGC 70
           L LF DM + GC ++V+L+NNLI  LSN++ L EC+ LL EMK +G +PT FT N IFGC
Sbjct: 477 LSLFRDMVRVGCKQNVLLYNNLIDKLSNSNRLEECYLLLKEMKGSGFRPTQFTHNSIFGC 536

Query: 69  LCRRQDVAGALNLLREMRARGHE 1
           LCRR+DV GAL+++REMR  GHE
Sbjct: 537 LCRREDVTGALDMVREMRVHGHE 559


>emb|CAN71434.1| hypothetical protein VITISV_010168 [Vitis vinifera]
          Length = 814

 Score =  110 bits (274), Expect = 2e-22
 Identities = 50/83 (60%), Positives = 64/83 (77%)
 Frame = -2

Query: 249 LGLFHDMKQCGCSRSVVLFNNLIQCLSNADSLNECFDLLNEMKETGLQPTHFTFNCIFGC 70
           L LF DM + GC ++V+L+NNLI  LSN++ L EC+ LL EMK +G +PT FT N IFGC
Sbjct: 437 LSLFRDMVRVGCKQNVLLYNNLIDKLSNSNRLEECYLLLKEMKGSGFRPTQFTHNSIFGC 496

Query: 69  LCRRQDVAGALNLLREMRARGHE 1
           LCRR+DV GAL+++REMR  GHE
Sbjct: 497 LCRREDVTGALDMVREMRVHGHE 519


>ref|XP_004142304.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g08310, mitochondrial-like [Cucumis sativus]
           gi|449510601|ref|XP_004163711.1| PREDICTED: putative
           pentatricopeptide repeat-containing protein At5g08310,
           mitochondrial-like [Cucumis sativus]
          Length = 849

 Score =  109 bits (272), Expect = 3e-22
 Identities = 49/83 (59%), Positives = 60/83 (72%)
 Frame = -2

Query: 249 LGLFHDMKQCGCSRSVVLFNNLIQCLSNADSLNECFDLLNEMKETGLQPTHFTFNCIFGC 70
           L LF DM Q GC R  +L+NNLI  L  +D L E + LL +M+++ LQPTHFT+N IFGC
Sbjct: 475 LSLFEDMVQLGCERDQLLYNNLIDALCKSDRLKESYKLLRDMEQSRLQPTHFTYNSIFGC 534

Query: 69  LCRRQDVAGALNLLREMRARGHE 1
           LCRR+D  GA+ LLREMR  GHE
Sbjct: 535 LCRREDTVGAIELLREMRGHGHE 557


>ref|XP_002534039.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223525946|gb|EEF28343.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 634

 Score =  101 bits (252), Expect = 5e-20
 Identities = 46/81 (56%), Positives = 62/81 (76%)
 Frame = -2

Query: 243 LFHDMKQCGCSRSVVLFNNLIQCLSNADSLNECFDLLNEMKETGLQPTHFTFNCIFGCLC 64
           LF DM + GC+R ++L+NNLI  L N+D L E + LL EM+E+G +PT FT N IFGCLC
Sbjct: 253 LFQDMAEIGCNRDLLLYNNLINGLCNSDRLEESYKLLKEMEESGFKPTQFTLNSIFGCLC 312

Query: 63  RRQDVAGALNLLREMRARGHE 1
           +RQDV+GAL+L+++MR  G E
Sbjct: 313 KRQDVSGALDLVKKMRLYGCE 333


>ref|XP_002307160.1| predicted protein [Populus trichocarpa] gi|222856609|gb|EEE94156.1|
           predicted protein [Populus trichocarpa]
          Length = 726

 Score =  101 bits (251), Expect = 7e-20
 Identities = 45/82 (54%), Positives = 61/82 (74%)
 Frame = -2

Query: 249 LGLFHDMKQCGCSRSVVLFNNLIQCLSNADSLNECFDLLNEMKETGLQPTHFTFNCIFGC 70
           +GLF DM + GC   ++L+NNLI  L  ++ L E   LL EM+E+G++PT FT NCIFGC
Sbjct: 344 VGLFRDMARIGCKPDLLLYNNLIDGLCTSNRLQESCGLLQEMEESGIEPTSFTNNCIFGC 403

Query: 69  LCRRQDVAGALNLLREMRARGH 4
           LCRR D++GAL+LL++MR  GH
Sbjct: 404 LCRRHDISGALHLLKKMRIHGH 425


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