BLASTX nr result

ID: Scutellaria22_contig00033876 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00033876
         (260 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAC23030.1| ring H2 zinc finger [Solanum tuberosum]                86   3e-15
ref|XP_002513986.1| zinc finger protein, putative [Ricinus commu...    81   8e-14
ref|XP_002284899.1| PREDICTED: E3 ubiquitin-protein ligase ATL6 ...    79   4e-13
ref|XP_002284024.1| PREDICTED: RING-H2 finger protein ATL11 [Vit...    78   7e-13
ref|XP_003523802.1| PREDICTED: RING-H2 finger protein ATL11-like...    68   7e-10

>dbj|BAC23030.1| ring H2 zinc finger [Solanum tuberosum]
          Length = 154

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 41/57 (71%), Positives = 47/57 (82%)
 Frame = +3

Query: 90  KFRSHSTGHSLVQPGQNLDRFTLRLPQGVRKEVVDRVALNRTGSCAAALPRVESSRR 260
           KFRSHSTGHSLV PG+NLDR+TLRLP+ VRK+V+DR  LNRT SCA  LPR  S+ R
Sbjct: 1   KFRSHSTGHSLVVPGENLDRYTLRLPEKVRKDVMDRALLNRTRSCAVTLPRHGSTTR 57


>ref|XP_002513986.1| zinc finger protein, putative [Ricinus communis]
           gi|223547072|gb|EEF48569.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 436

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 45/80 (56%), Positives = 55/80 (68%), Gaps = 2/80 (2%)
 Frame = +3

Query: 27  SSSLENPNLPPRSWSIKPRVGKF--RSHSTGHSLVQPGQNLDRFTLRLPQGVRKEVVDRV 200
           S S  + N PPRSWS   R  +   RSHSTGHSLVQPG+NLDRFTLRLP+ VR ++++  
Sbjct: 251 SLSTASQNRPPRSWSTGWRFARLFPRSHSTGHSLVQPGENLDRFTLRLPEDVRSQLLN-T 309

Query: 201 ALNRTGSCAAALPRVESSRR 260
            LNR  SC  A PR  SS++
Sbjct: 310 HLNRAKSC-VAFPRASSSKK 328


>ref|XP_002284899.1| PREDICTED: E3 ubiquitin-protein ligase ATL6 isoform 1 [Vitis
           vinifera] gi|147843962|emb|CAN83712.1| hypothetical
           protein VITISV_011102 [Vitis vinifera]
          Length = 420

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 49/82 (59%), Positives = 60/82 (73%), Gaps = 1/82 (1%)
 Frame = +3

Query: 18  INRSSSLENPNLPPRSWSIKPRVGKF-RSHSTGHSLVQPGQNLDRFTLRLPQGVRKEVVD 194
           IN + SL   N PPRS S +PR  KF RSHSTGHSL+QPG+N +RFTL+LP+ VRK+++ 
Sbjct: 245 INPNQSLHQ-NRPPRSKSTRPR--KFPRSHSTGHSLIQPGENCERFTLKLPEDVRKQIMK 301

Query: 195 RVALNRTGSCAAALPRVESSRR 260
           R ALNRT S    LPR  SSR+
Sbjct: 302 R-ALNRTTS-LLVLPRDGSSRQ 321


>ref|XP_002284024.1| PREDICTED: RING-H2 finger protein ATL11 [Vitis vinifera]
          Length = 409

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 43/76 (56%), Positives = 59/76 (77%), Gaps = 2/76 (2%)
 Frame = +3

Query: 39  ENPNLPPRSWSIKPRV-GKF-RSHSTGHSLVQPGQNLDRFTLRLPQGVRKEVVDRVALNR 212
           + PN PPRS SI+ R+ G F RSHSTGHSL+QPG+N +RFTLRLP+ +R ++++  +L+R
Sbjct: 242 DTPNRPPRSRSIRARITGMFPRSHSTGHSLIQPGENRERFTLRLPEEIRNQIMN-TSLSR 300

Query: 213 TGSCAAALPRVESSRR 260
           T S   ALP V+SS+R
Sbjct: 301 TKSW-VALPGVQSSKR 315


>ref|XP_003523802.1| PREDICTED: RING-H2 finger protein ATL11-like [Glycine max]
          Length = 340

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 39/79 (49%), Positives = 49/79 (62%), Gaps = 4/79 (5%)
 Frame = +3

Query: 36  LENPNLPPRSWSIKPRVGKF--RSHSTGHSLVQPGQNLDRFTLRLPQGVRKEVVDRVALN 209
           L     PPR WS    +  +  RSHSTGHSLVQPG+N +RFTLRLP+ VR E++    L+
Sbjct: 210 LSQNRTPPRPWSTGLSIASWFPRSHSTGHSLVQPGENCERFTLRLPEEVRNELM----LS 265

Query: 210 RTGSCAAAL--PRVESSRR 260
           RT SC  ++   R  S RR
Sbjct: 266 RTKSCGVSVTFTRENSGRR 284


Top