BLASTX nr result

ID: Scutellaria22_contig00032898 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00032898
         (400 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002869254.1| predicted protein [Arabidopsis lyrata subsp....   126   2e-27
ref|NP_001078482.1| DNA polymerase theta subunit [Arabidopsis th...   126   2e-27
ref|XP_002281624.2| PREDICTED: LOW QUALITY PROTEIN: DNA polymera...   120   1e-25
emb|CBI20904.3| unnamed protein product [Vitis vinifera]              120   1e-25
ref|XP_003545584.1| PREDICTED: DNA polymerase theta-like [Glycin...   115   4e-24

>ref|XP_002869254.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
            gi|297315090|gb|EFH45513.1| predicted protein
            [Arabidopsis lyrata subsp. lyrata]
          Length = 2147

 Score =  126 bits (317), Expect = 2e-27
 Identities = 66/105 (62%), Positives = 73/105 (69%)
 Frame = +1

Query: 1    VNSNCQGSAADIIKIAMICLHNVIGEDTEASCPSFIDAEKFQMLKGRCRILLQVHDELVL 180
            VNS CQGSAADIIKIAMI +++ I ED + +  S     +F MLKGRCRILLQVHDELVL
Sbjct: 2041 VNSMCQGSAADIIKIAMINIYSAIAEDVDTTASSSSSETRFHMLKGRCRILLQVHDELVL 2100

Query: 181  EADPLVVKEAGLLLQTCMETAVSXXXXXXXXXXAGKTWGSLEPFQ 315
            E DP  VK A +LLQT ME AVS           GKTWGSLEPFQ
Sbjct: 2101 EVDPSYVKVAAMLLQTSMENAVSLLVPLHVKLKVGKTWGSLEPFQ 2145


>ref|NP_001078482.1| DNA polymerase theta subunit [Arabidopsis thaliana]
            gi|62241195|dbj|BAD93700.1| helicase and polymerase
            containing protein TEBICHI [Arabidopsis thaliana]
            gi|332660705|gb|AEE86105.1| DNA polymerase theta subunit
            [Arabidopsis thaliana]
          Length = 2154

 Score =  126 bits (316), Expect = 2e-27
 Identities = 66/105 (62%), Positives = 73/105 (69%)
 Frame = +1

Query: 1    VNSNCQGSAADIIKIAMICLHNVIGEDTEASCPSFIDAEKFQMLKGRCRILLQVHDELVL 180
            VNS CQGSAADIIKIAMI +++ I ED + +  S     +F MLKGRCRILLQVHDELVL
Sbjct: 2048 VNSMCQGSAADIIKIAMINIYSAIAEDVDTAASSSSSETRFHMLKGRCRILLQVHDELVL 2107

Query: 181  EADPLVVKEAGLLLQTCMETAVSXXXXXXXXXXAGKTWGSLEPFQ 315
            E DP  VK A +LLQT ME AVS           GKTWGSLEPFQ
Sbjct: 2108 EVDPSYVKLAAMLLQTSMENAVSLLVPLHVKLKVGKTWGSLEPFQ 2152


>ref|XP_002281624.2| PREDICTED: LOW QUALITY PROTEIN: DNA polymerase theta-like [Vitis
            vinifera]
          Length = 2181

 Score =  120 bits (301), Expect = 1e-25
 Identities = 64/104 (61%), Positives = 72/104 (69%)
 Frame = +1

Query: 1    VNSNCQGSAADIIKIAMICLHNVIGEDTEASCPSFIDAEKFQMLKGRCRILLQVHDELVL 180
            VNS CQGSAADIIKIAMI +H+VI E  +    S     KF MLKGRCRI+LQVHDELVL
Sbjct: 2062 VNSICQGSAADIIKIAMINIHSVIAEGVDEPNSSTELPAKFHMLKGRCRIILQVHDELVL 2121

Query: 181  EADPLVVKEAGLLLQTCMETAVSXXXXXXXXXXAGKTWGSLEPF 312
            E DP V+KEAGLLL+  ME + S           G+TWGSLEPF
Sbjct: 2122 EVDPSVMKEAGLLLKMTMENSTSLLVPLLVKLKVGRTWGSLEPF 2165


>emb|CBI20904.3| unnamed protein product [Vitis vinifera]
          Length = 2091

 Score =  120 bits (301), Expect = 1e-25
 Identities = 64/104 (61%), Positives = 72/104 (69%)
 Frame = +1

Query: 1    VNSNCQGSAADIIKIAMICLHNVIGEDTEASCPSFIDAEKFQMLKGRCRILLQVHDELVL 180
            VNS CQGSAADIIKIAMI +H+VI E  +    S     KF MLKGRCRI+LQVHDELVL
Sbjct: 1972 VNSICQGSAADIIKIAMINIHSVIAEGVDEPNSSTELPAKFHMLKGRCRIILQVHDELVL 2031

Query: 181  EADPLVVKEAGLLLQTCMETAVSXXXXXXXXXXAGKTWGSLEPF 312
            E DP V+KEAGLLL+  ME + S           G+TWGSLEPF
Sbjct: 2032 EVDPSVMKEAGLLLKMTMENSTSLLVPLLVKLKVGRTWGSLEPF 2075


>ref|XP_003545584.1| PREDICTED: DNA polymerase theta-like [Glycine max]
          Length = 2147

 Score =  115 bits (288), Expect = 4e-24
 Identities = 62/104 (59%), Positives = 72/104 (69%)
 Frame = +1

Query: 1    VNSNCQGSAADIIKIAMICLHNVIGEDTEASCPSFIDAEKFQMLKGRCRILLQVHDELVL 180
            VNS CQGSAADIIKIAM+ +++ I    ++   S   A KF MLK RCRILLQVHDEL+L
Sbjct: 2030 VNSICQGSAADIIKIAMLRIYSAIVTGFDSPDSSSSLATKFHMLKDRCRILLQVHDELML 2089

Query: 181  EADPLVVKEAGLLLQTCMETAVSXXXXXXXXXXAGKTWGSLEPF 312
            E DP V+KEA LLLQT ME AVS           G+TWGSLEP+
Sbjct: 2090 EVDPSVIKEAALLLQTSMENAVSLLVPLHVKLKVGRTWGSLEPY 2133


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