BLASTX nr result

ID: Scutellaria22_contig00032588 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00032588
         (204 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003518706.1| PREDICTED: polyadenylate-binding protein 2-l...    96   4e-18
ref|XP_003529405.1| PREDICTED: polyadenylate-binding protein 2-l...    94   1e-17
emb|CBI19489.3| unnamed protein product [Vitis vinifera]               93   3e-17
ref|XP_002284923.1| PREDICTED: polyadenylate-binding protein 2 [...    93   3e-17
gb|AFP74112.1| poly-A binding protein, partial [Nicotiana bentha...    92   4e-17

>ref|XP_003518706.1| PREDICTED: polyadenylate-binding protein 2-like [Glycine max]
          Length = 646

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 45/66 (68%), Positives = 55/66 (83%)
 Frame = -3

Query: 202 KDSAQKAIAELNGMLLNGEQVYVGSYLTKQERELLVDKSNFTNVFVKNLCDSTTEDDLMN 23
           ++SAQKAI +LNGMLLN +QVYVG +L KQERE   DK+ F NVFVKNL +STT+D+L N
Sbjct: 166 EESAQKAIEKLNGMLLNDKQVYVGPFLRKQERESTADKAKFNNVFVKNLSESTTDDELKN 225

Query: 22  IFGEFG 5
           +FGEFG
Sbjct: 226 VFGEFG 231


>ref|XP_003529405.1| PREDICTED: polyadenylate-binding protein 2-like [Glycine max]
          Length = 651

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 45/66 (68%), Positives = 54/66 (81%)
 Frame = -3

Query: 202 KDSAQKAIAELNGMLLNGEQVYVGSYLTKQERELLVDKSNFTNVFVKNLCDSTTEDDLMN 23
           ++SAQKAI +LNGMLLN +QVYVG +L KQERE   DK+ F NVFVKNL +STT+D+L N
Sbjct: 169 EESAQKAIEKLNGMLLNDKQVYVGPFLRKQERESAADKAKFNNVFVKNLSESTTDDELKN 228

Query: 22  IFGEFG 5
            FGEFG
Sbjct: 229 TFGEFG 234


>emb|CBI19489.3| unnamed protein product [Vitis vinifera]
          Length = 621

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 43/67 (64%), Positives = 56/67 (83%)
 Frame = -3

Query: 202 KDSAQKAIAELNGMLLNGEQVYVGSYLTKQERELLVDKSNFTNVFVKNLCDSTTEDDLMN 23
           ++SAQ AI +LNGML+N +QVYVG +L KQERE  ++K+ F NV+VKNL +STTE+DL N
Sbjct: 156 EESAQNAIDKLNGMLINDKQVYVGQFLRKQERETALNKTKFNNVYVKNLSESTTEEDLKN 215

Query: 22  IFGEFGL 2
           IFGEFG+
Sbjct: 216 IFGEFGI 222


>ref|XP_002284923.1| PREDICTED: polyadenylate-binding protein 2 [Vitis vinifera]
           gi|147773643|emb|CAN76464.1| hypothetical protein
           VITISV_017035 [Vitis vinifera]
          Length = 640

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 43/67 (64%), Positives = 56/67 (83%)
 Frame = -3

Query: 202 KDSAQKAIAELNGMLLNGEQVYVGSYLTKQERELLVDKSNFTNVFVKNLCDSTTEDDLMN 23
           ++SAQ AI +LNGML+N +QVYVG +L KQERE  ++K+ F NV+VKNL +STTE+DL N
Sbjct: 156 EESAQNAIDKLNGMLINDKQVYVGQFLRKQERETALNKTKFNNVYVKNLSESTTEEDLKN 215

Query: 22  IFGEFGL 2
           IFGEFG+
Sbjct: 216 IFGEFGI 222


>gb|AFP74112.1| poly-A binding protein, partial [Nicotiana benthamiana]
          Length = 643

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 43/65 (66%), Positives = 55/65 (84%)
 Frame = -3

Query: 199 DSAQKAIAELNGMLLNGEQVYVGSYLTKQERELLVDKSNFTNVFVKNLCDSTTEDDLMNI 20
           ++AQKAI +LNGMLLN +QVYVG ++ KQER++ VDK+ FTNVFVKNL +ST E++L  I
Sbjct: 166 EAAQKAIEKLNGMLLNDKQVYVGPFVRKQERDMAVDKTRFTNVFVKNLSESTLEEELRKI 225

Query: 19  FGEFG 5
           FGEFG
Sbjct: 226 FGEFG 230


Top