BLASTX nr result

ID: Scutellaria22_contig00032527 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00032527
         (296 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280748.1| PREDICTED: DNA repair protein RAD51 homolog ...   161   6e-38
ref|XP_003605159.1| DNA repair protein RAD51-like protein [Medic...   152   3e-35
ref|XP_003609084.1| DNA repair protein RAD51-like protein [Medic...   152   4e-35
gb|AAL84941.1| At2g45280/F4L23.21 [Arabidopsis thaliana]              150   8e-35
ref|NP_001189749.1| DNA repair protein RAD51-like 3 [Arabidopsis...   150   8e-35

>ref|XP_002280748.1| PREDICTED: DNA repair protein RAD51 homolog 3 [Vitis vinifera]
           gi|296089196|emb|CBI38899.3| unnamed protein product
           [Vitis vinifera]
          Length = 346

 Score =  161 bits (407), Expect = 6e-38
 Identities = 79/94 (84%), Positives = 85/94 (90%)
 Frame = -1

Query: 284 NGNCAIMNGAQTAWDMLHEEESSLCITTSCSDLDEILGGGIHSKEVTEIGGVPGIGKTQL 105
           +G+ AI+NGAQTAWDMLHEEES  CITTSC DLD+ILGGGI  KEVTEIGGVPGIGKTQL
Sbjct: 63  DGSHAIVNGAQTAWDMLHEEESLKCITTSCVDLDDILGGGIKCKEVTEIGGVPGIGKTQL 122

Query: 104 GIQLAVNAQIPADNGGLGGKAIYIDTEGSFMVER 3
           GIQLAVN QIP + GGLGGKAIYIDTEGSFM+ER
Sbjct: 123 GIQLAVNVQIPVNYGGLGGKAIYIDTEGSFMLER 156


>ref|XP_003605159.1| DNA repair protein RAD51-like protein [Medicago truncatula]
           gi|355506214|gb|AES87356.1| DNA repair protein
           RAD51-like protein [Medicago truncatula]
          Length = 347

 Score =  152 bits (384), Expect = 3e-35
 Identities = 75/98 (76%), Positives = 81/98 (82%)
 Frame = -1

Query: 296 DKIENGNCAIMNGAQTAWDMLHEEESSLCITTSCSDLDEILGGGIHSKEVTEIGGVPGIG 117
           DK    N  +++G QTAWDML+EE  S  ITTSC DLD ILGGGI+ KEVTEIGGVPGIG
Sbjct: 60  DKSSGSNANVIHGGQTAWDMLNEERFSSLITTSCLDLDNILGGGINCKEVTEIGGVPGIG 119

Query: 116 KTQLGIQLAVNAQIPADNGGLGGKAIYIDTEGSFMVER 3
           KTQ+GIQLAVN QIP D GGLGGKAIYIDTEGSFMVER
Sbjct: 120 KTQIGIQLAVNVQIPLDYGGLGGKAIYIDTEGSFMVER 157


>ref|XP_003609084.1| DNA repair protein RAD51-like protein [Medicago truncatula]
           gi|357477663|ref|XP_003609117.1| DNA repair protein
           RAD51-like protein [Medicago truncatula]
           gi|355510139|gb|AES91281.1| DNA repair protein
           RAD51-like protein [Medicago truncatula]
           gi|355510172|gb|AES91314.1| DNA repair protein
           RAD51-like protein [Medicago truncatula]
          Length = 347

 Score =  152 bits (383), Expect = 4e-35
 Identities = 75/98 (76%), Positives = 81/98 (82%)
 Frame = -1

Query: 296 DKIENGNCAIMNGAQTAWDMLHEEESSLCITTSCSDLDEILGGGIHSKEVTEIGGVPGIG 117
           DK    N  +++G QTAWDML+EE  S  ITTSC DLD ILGGGI+ KEVTEIGGVPGIG
Sbjct: 60  DKSSGSNTNVIDGGQTAWDMLNEERFSSLITTSCLDLDNILGGGINCKEVTEIGGVPGIG 119

Query: 116 KTQLGIQLAVNAQIPADNGGLGGKAIYIDTEGSFMVER 3
           KTQ+GIQLAVN QIP D GGLGGKAIYIDTEGSFMVER
Sbjct: 120 KTQIGIQLAVNVQIPLDYGGLGGKAIYIDTEGSFMVER 157


>gb|AAL84941.1| At2g45280/F4L23.21 [Arabidopsis thaliana]
          Length = 363

 Score =  150 bits (380), Expect = 8e-35
 Identities = 73/94 (77%), Positives = 83/94 (88%)
 Frame = -1

Query: 284 NGNCAIMNGAQTAWDMLHEEESSLCITTSCSDLDEILGGGIHSKEVTEIGGVPGIGKTQL 105
           NG+ +++NGA+ AWDMLHEEES   ITTSCSDLD ILGGGI  ++VTEIGGVPGIGKTQ+
Sbjct: 80  NGSRSLINGAKNAWDMLHEEESLPRITTSCSDLDNILGGGISCRDVTEIGGVPGIGKTQI 139

Query: 104 GIQLAVNAQIPADNGGLGGKAIYIDTEGSFMVER 3
           GIQL+VN QIP + GGLGGKAIYIDTEGSFMVER
Sbjct: 140 GIQLSVNVQIPRECGGLGGKAIYIDTEGSFMVER 173


>ref|NP_001189749.1| DNA repair protein RAD51-like 3 [Arabidopsis thaliana]
           gi|330255440|gb|AEC10534.1| DNA repair protein
           RAD51-like 3 [Arabidopsis thaliana]
          Length = 387

 Score =  150 bits (380), Expect = 8e-35
 Identities = 73/94 (77%), Positives = 83/94 (88%)
 Frame = -1

Query: 284 NGNCAIMNGAQTAWDMLHEEESSLCITTSCSDLDEILGGGIHSKEVTEIGGVPGIGKTQL 105
           NG+ +++NGA+ AWDMLHEEES   ITTSCSDLD ILGGGI  ++VTEIGGVPGIGKTQ+
Sbjct: 104 NGSRSLINGAKNAWDMLHEEESLPRITTSCSDLDNILGGGISCRDVTEIGGVPGIGKTQI 163

Query: 104 GIQLAVNAQIPADNGGLGGKAIYIDTEGSFMVER 3
           GIQL+VN QIP + GGLGGKAIYIDTEGSFMVER
Sbjct: 164 GIQLSVNVQIPRECGGLGGKAIYIDTEGSFMVER 197


Top