BLASTX nr result

ID: Scutellaria22_contig00032487 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00032487
         (380 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAF76467.1|AC020622_1 Contains similarity to excision repair ...   132   3e-29
ref|NP_001184887.1| 5'-3' exonuclease-like protein [Arabidopsis ...   132   3e-29
ref|NP_171691.2| 5'-3' exonuclease-like protein [Arabidopsis tha...   132   3e-29
ref|XP_004144985.1| PREDICTED: flap endonuclease GEN-like 1-like...   131   5e-29
ref|XP_002889348.1| hypothetical protein ARALYDRAFT_311256 [Arab...   130   1e-28

>gb|AAF76467.1|AC020622_1 Contains similarity to excision repair protein ERCC5 from Homo
           sapiens gi|1082359 and contains XPG N-terminal PF|00752
           and XPG I-region PF|00867 domains [Arabidopsis thaliana]
          Length = 497

 Score =  132 bits (332), Expect = 3e-29
 Identities = 58/71 (81%), Positives = 68/71 (95%)
 Frame = +1

Query: 166 MGVGGHFWDLLKPHARFEGFDFLRNKRVAVDLSYWIVQHETAIKGYVRNPHIRLTFFRTV 345
           MGVGG+FWDLL+P+A+ +GFDFLRNKRVAVDLS+WIVQHETA+KG+V  PH+RLTFFRT+
Sbjct: 1   MGVGGNFWDLLRPYAQQQGFDFLRNKRVAVDLSFWIVQHETAVKGFVLKPHLRLTFFRTI 60

Query: 346 NLFSKFGAYPV 378
           NLFSKFGAYPV
Sbjct: 61  NLFSKFGAYPV 71


>ref|NP_001184887.1| 5'-3' exonuclease-like protein [Arabidopsis thaliana]
           gi|332189225|gb|AEE27346.1| 5'-3' exonuclease-like
           protein [Arabidopsis thaliana]
          Length = 598

 Score =  132 bits (332), Expect = 3e-29
 Identities = 58/71 (81%), Positives = 68/71 (95%)
 Frame = +1

Query: 166 MGVGGHFWDLLKPHARFEGFDFLRNKRVAVDLSYWIVQHETAIKGYVRNPHIRLTFFRTV 345
           MGVGG+FWDLL+P+A+ +GFDFLRNKRVAVDLS+WIVQHETA+KG+V  PH+RLTFFRT+
Sbjct: 1   MGVGGNFWDLLRPYAQQQGFDFLRNKRVAVDLSFWIVQHETAVKGFVLKPHLRLTFFRTI 60

Query: 346 NLFSKFGAYPV 378
           NLFSKFGAYPV
Sbjct: 61  NLFSKFGAYPV 71


>ref|NP_171691.2| 5'-3' exonuclease-like protein [Arabidopsis thaliana]
           gi|357529503|sp|Q9LPD2.3|GENL1_ARATH RecName: Full=Flap
           endonuclease GEN-like 1 gi|332189224|gb|AEE27345.1|
           5'-3' exonuclease-like protein [Arabidopsis thaliana]
          Length = 599

 Score =  132 bits (332), Expect = 3e-29
 Identities = 58/71 (81%), Positives = 68/71 (95%)
 Frame = +1

Query: 166 MGVGGHFWDLLKPHARFEGFDFLRNKRVAVDLSYWIVQHETAIKGYVRNPHIRLTFFRTV 345
           MGVGG+FWDLL+P+A+ +GFDFLRNKRVAVDLS+WIVQHETA+KG+V  PH+RLTFFRT+
Sbjct: 1   MGVGGNFWDLLRPYAQQQGFDFLRNKRVAVDLSFWIVQHETAVKGFVLKPHLRLTFFRTI 60

Query: 346 NLFSKFGAYPV 378
           NLFSKFGAYPV
Sbjct: 61  NLFSKFGAYPV 71


>ref|XP_004144985.1| PREDICTED: flap endonuclease GEN-like 1-like [Cucumis sativus]
           gi|449472478|ref|XP_004153607.1| PREDICTED: flap
           endonuclease GEN-like 1-like [Cucumis sativus]
           gi|449516535|ref|XP_004165302.1| PREDICTED: flap
           endonuclease GEN-like 1-like [Cucumis sativus]
          Length = 606

 Score =  131 bits (330), Expect = 5e-29
 Identities = 59/71 (83%), Positives = 66/71 (92%)
 Frame = +1

Query: 166 MGVGGHFWDLLKPHARFEGFDFLRNKRVAVDLSYWIVQHETAIKGYVRNPHIRLTFFRTV 345
           MGVGGHFWDLLKP+AR EGFDFLRNKRVAVDLS+WIVQHETAIK   R+PH+RLTFFRT+
Sbjct: 1   MGVGGHFWDLLKPNARTEGFDFLRNKRVAVDLSFWIVQHETAIKSTARSPHLRLTFFRTI 60

Query: 346 NLFSKFGAYPV 378
            LF+KFGA+PV
Sbjct: 61  TLFAKFGAFPV 71


>ref|XP_002889348.1| hypothetical protein ARALYDRAFT_311256 [Arabidopsis lyrata subsp.
           lyrata] gi|297335190|gb|EFH65607.1| hypothetical protein
           ARALYDRAFT_311256 [Arabidopsis lyrata subsp. lyrata]
          Length = 590

 Score =  130 bits (327), Expect = 1e-28
 Identities = 57/71 (80%), Positives = 67/71 (94%)
 Frame = +1

Query: 166 MGVGGHFWDLLKPHARFEGFDFLRNKRVAVDLSYWIVQHETAIKGYVRNPHIRLTFFRTV 345
           MGVGG+FWDLL+P+A+  GFD+LRNKRVAVDLS+WIVQHETA+KG+V  PH+RLTFFRT+
Sbjct: 1   MGVGGNFWDLLRPYAQQRGFDYLRNKRVAVDLSFWIVQHETAVKGFVLKPHLRLTFFRTI 60

Query: 346 NLFSKFGAYPV 378
           NLFSKFGAYPV
Sbjct: 61  NLFSKFGAYPV 71


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