BLASTX nr result

ID: Scutellaria22_contig00032481 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00032481
         (399 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI37517.3| unnamed protein product [Vitis vinifera]              164   9e-39
ref|XP_002264607.1| PREDICTED: DNA topoisomerase 3-alpha [Vitis ...   164   9e-39
ref|XP_002527391.1| prokaryotic DNA topoisomerase, putative [Ric...   162   3e-38
ref|XP_002307047.1| predicted protein [Populus trichocarpa] gi|2...   161   5e-38
ref|XP_004136599.1| PREDICTED: DNA topoisomerase 3-alpha-like [C...   154   9e-36

>emb|CBI37517.3| unnamed protein product [Vitis vinifera]
          Length = 589

 Score =  164 bits (414), Expect = 9e-39
 Identities = 83/134 (61%), Positives = 100/134 (74%), Gaps = 2/134 (1%)
 Frame = +3

Query: 3   KSFLIGFMPLKTQTCVFHPQNLVRHL*--YDEMGKDLWKPNLRAKMEEDMKQVKMGAKSK 176
           K  L  F   K     F P NL   L   YD+MG +LWKP LR+ ME DMK V +G K +
Sbjct: 196 KKLLDRFYATKDSNTRFSPTNLGEALVMGYDDMGYELWKPYLRSMMECDMKAVSIGTKRR 255

Query: 177 AEVLATCLQEMKACFVDARINKGKLFEAMAVFFERSNRSNGNEQYAIGEVVRKCGLCQES 356
            EVL TCL++MKACF+DAR+NK KL EAMA+FFERSNRS+G+EQ+ +G+VVR+C LCQES
Sbjct: 256 NEVLTTCLEQMKACFLDARLNKVKLLEAMALFFERSNRSSGDEQHEVGDVVRQCTLCQES 315

Query: 357 DMVLRKKPDGNFMV 398
           DMVLR+KPDGNFMV
Sbjct: 316 DMVLRRKPDGNFMV 329


>ref|XP_002264607.1| PREDICTED: DNA topoisomerase 3-alpha [Vitis vinifera]
          Length = 914

 Score =  164 bits (414), Expect = 9e-39
 Identities = 83/134 (61%), Positives = 100/134 (74%), Gaps = 2/134 (1%)
 Frame = +3

Query: 3   KSFLIGFMPLKTQTCVFHPQNLVRHL*--YDEMGKDLWKPNLRAKMEEDMKQVKMGAKSK 176
           K  L  F   K     F P NL   L   YD+MG +LWKP LR+ ME DMK V +G K +
Sbjct: 521 KKLLDRFYATKDSNTRFSPTNLGEALVMGYDDMGYELWKPYLRSMMECDMKAVSIGTKRR 580

Query: 177 AEVLATCLQEMKACFVDARINKGKLFEAMAVFFERSNRSNGNEQYAIGEVVRKCGLCQES 356
            EVL TCL++MKACF+DAR+NK KL EAMA+FFERSNRS+G+EQ+ +G+VVR+C LCQES
Sbjct: 581 NEVLTTCLEQMKACFLDARLNKVKLLEAMALFFERSNRSSGDEQHEVGDVVRQCTLCQES 640

Query: 357 DMVLRKKPDGNFMV 398
           DMVLR+KPDGNFMV
Sbjct: 641 DMVLRRKPDGNFMV 654


>ref|XP_002527391.1| prokaryotic DNA topoisomerase, putative [Ricinus communis]
           gi|223533243|gb|EEF34998.1| prokaryotic DNA
           topoisomerase, putative [Ricinus communis]
          Length = 833

 Score =  162 bits (410), Expect = 3e-38
 Identities = 83/134 (61%), Positives = 100/134 (74%), Gaps = 2/134 (1%)
 Frame = +3

Query: 3   KSFLIGFMPLKTQTCVFHPQNLVRHL*--YDEMGKDLWKPNLRAKMEEDMKQVKMGAKSK 176
           K  L  F   K     F P NL   L   YD+MG +LWKPNLR+ ME DMK+V MG KSK
Sbjct: 524 KKLLDRFYATKDANTRFSPTNLGEALVMGYDDMGYELWKPNLRSMMEYDMKEVSMGHKSK 583

Query: 177 AEVLATCLQEMKACFVDARINKGKLFEAMAVFFERSNRSNGNEQYAIGEVVRKCGLCQES 356
           AEVL TCLQ+MK CF+DARINK KL EAMAVFFERS+RS+GN+ +A  ++VR+CGLC+E+
Sbjct: 584 AEVLETCLQQMKTCFLDARINKVKLLEAMAVFFERSDRSSGNDNHATVDIVRQCGLCRET 643

Query: 357 DMVLRKKPDGNFMV 398
           +MVLR+  DGNFMV
Sbjct: 644 NMVLRRNRDGNFMV 657


>ref|XP_002307047.1| predicted protein [Populus trichocarpa] gi|222856496|gb|EEE94043.1|
           predicted protein [Populus trichocarpa]
          Length = 910

 Score =  161 bits (408), Expect = 5e-38
 Identities = 83/134 (61%), Positives = 100/134 (74%), Gaps = 2/134 (1%)
 Frame = +3

Query: 3   KSFLIGFMPLKTQTCVFHPQNLVRHL*--YDEMGKDLWKPNLRAKMEEDMKQVKMGAKSK 176
           K  L  F   K     F P NL   L   YD+MG +LWKPNLR+ ME DMK+V +G KSK
Sbjct: 522 KKLLDRFYVTKDANTRFSPTNLGEALVMGYDDMGYELWKPNLRSLMECDMKEVSVGNKSK 581

Query: 177 AEVLATCLQEMKACFVDARINKGKLFEAMAVFFERSNRSNGNEQYAIGEVVRKCGLCQES 356
           AEVLATCLQ+MKACF+DA++NK KL EAMA+FF RS+RSNG++  A+GE VR CGLCQE+
Sbjct: 582 AEVLATCLQQMKACFLDAKVNKVKLLEAMAIFFNRSDRSNGDDSSALGENVRPCGLCQEA 641

Query: 357 DMVLRKKPDGNFMV 398
           +MVL+K  DGNFMV
Sbjct: 642 NMVLKKNRDGNFMV 655


>ref|XP_004136599.1| PREDICTED: DNA topoisomerase 3-alpha-like [Cucumis sativus]
          Length = 925

 Score =  154 bits (388), Expect = 9e-36
 Identities = 80/134 (59%), Positives = 94/134 (70%), Gaps = 2/134 (1%)
 Frame = +3

Query: 3   KSFLIGFMPLKTQTCVFHPQNLVRHL*--YDEMGKDLWKPNLRAKMEEDMKQVKMGAKSK 176
           K  L  F   K     F P NL   L   YD+MG +LWKPNLRA ME +MK V  G K K
Sbjct: 528 KKLLDRFYATKDANTRFTPTNLGEALVMGYDDMGYNLWKPNLRAIMEHEMKAVSEGTKRK 587

Query: 177 AEVLATCLQEMKACFVDARINKGKLFEAMAVFFERSNRSNGNEQYAIGEVVRKCGLCQES 356
            EVLA+CLQ+MK CF+DAR+NK KL EAM VFFERSN S G+E  A+GEVV+ CGLCQ+S
Sbjct: 588 DEVLASCLQQMKTCFLDARVNKQKLLEAMEVFFERSNGSGGDENRAVGEVVQLCGLCQDS 647

Query: 357 DMVLRKKPDGNFMV 398
           DMVL++  DGN+MV
Sbjct: 648 DMVLKRNRDGNYMV 661


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