BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00032357
         (579 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P03555.1|POL_CAMVC RecName: Full=Enzymatic polyprotein; Inclu...   177   1e-42
gb|ABX80500.1| RdRp [Cauliflower mosaic virus]                        177   1e-42
ref|NP_056728.1| reverse transcriptase [Cauliflower mosaic virus...   176   3e-42
gb|AFI61742.1| reverse transcriptase [Cauliflower mosaic virus]       176   3e-42
ref|YP_006907834.1| polyprotein [Horseradish latent virus] gi|57...   176   3e-42

>sp|P03555.1|POL_CAMVC RecName: Full=Enzymatic polyprotein; Includes: RecName:
           Full=Aspartic protease; Includes: RecName:
           Full=Endonuclease; Includes: RecName: Full=Reverse
           transcriptase
          Length = 679

 Score =  177 bits (449), Expect = 1e-42
 Identities = 93/196 (47%), Positives = 127/196 (64%), Gaps = 4/196 (2%)
 Frame = +3

Query: 3   PESLWENAPHPIKAKIADGSEIKLDRIVKDLVVFFAGERFIIHETYQQEIGIDFLLGNNF 182
           PE  W NA  PI  KIADGS I + ++ KD+ +  AGE F I   YQQE GIDF++GNNF
Sbjct: 59  PEEHWVNAERPIMVKIADGSSITISKVCKDIDLIIAGEIFKIPTVYQQESGIDFIIGNNF 118

Query: 183 CQQYEPLVQYTDRIYLRKKNDYNGKLETILIQKRQVAYQRGLPGFLESRKNLSKKHSPEP 362
           CQ YEP +Q+TDR+   K   Y      + I K   A + G+ GFLES K  SK   PEP
Sbjct: 119 CQLYEPFIQFTDRVIFTKNKSY-----PVHITKLTRAVRVGIEGFLESMKKRSKTQQPEP 173

Query: 363 INITPQKTES----VSTFLEGGKVNITEQVFLSNLNKIGKIKDLLKQVCSENPLDPEKTK 530
           +NI+  K E+    ++   EG +++  E++F++   ++ KI++LL++VCSENPLDP KTK
Sbjct: 174 VNISTNKIENPLEEIAILSEGRRLS-EEKLFITQ-QRMQKIEELLEKVCSENPLDPNKTK 231

Query: 531 KWMKASIKLIEPGKFV 578
           +WMKASIKL +P K +
Sbjct: 232 QWMKASIKLSDPSKAI 247


>gb|ABX80500.1| RdRp [Cauliflower mosaic virus]
          Length = 401

 Score =  177 bits (449), Expect = 1e-42
 Identities = 94/196 (47%), Positives = 126/196 (64%), Gaps = 4/196 (2%)
 Frame = +3

Query: 3   PESLWENAPHPIKAKIADGSEIKLDRIVKDLVVFFAGERFIIHETYQQEIGIDFLLGNNF 182
           PE  W NA  PI  KIADGS I + ++ KD+ +  AGE F I   YQQE GIDF++GNNF
Sbjct: 12  PEEHWVNAERPIMVKIADGSSITISKVCKDIDLIIAGEIFRIPTVYQQESGIDFIIGNNF 71

Query: 183 CQQYEPLVQYTDRIYLRKKNDYNGKLETILIQKRQVAYQRGLPGFLESRKNLSKKHSPEP 362
           CQ YEP +Q+TDR+   K   Y      + I K   A + G  GFLES K  SK   PEP
Sbjct: 72  CQLYEPFIQFTDRVIFTKNKSY-----PVHIAKLTRAVRVGTEGFLESMKKRSKTQQPEP 126

Query: 363 INITPQKTES----VSTFLEGGKVNITEQVFLSNLNKIGKIKDLLKQVCSENPLDPEKTK 530
           +NI+  K E+    ++   EG K++  E++F++   ++ KI++LL++VCSENPLDP KTK
Sbjct: 127 VNISTNKIENPLEEIAILSEGRKLS-EEKLFITQ-QRMQKIEELLEKVCSENPLDPNKTK 184

Query: 531 KWMKASIKLIEPGKFV 578
           +WMKASIKL +P K +
Sbjct: 185 QWMKASIKLSDPSKTI 200


>ref|NP_056728.1| reverse transcriptase [Cauliflower mosaic virus]
           gi|130592|sp|P03554.1|POL_CAMVS RecName: Full=Enzymatic
           polyprotein; Includes: RecName: Full=Aspartic protease;
           Includes: RecName: Full=Endonuclease; Includes: RecName:
           Full=Reverse transcriptase gi|58826|emb|CAA23460.1|
           unnamed protein product [Cauliflower mosaic virus]
          Length = 679

 Score =  176 bits (446), Expect = 3e-42
 Identities = 93/196 (47%), Positives = 126/196 (64%), Gaps = 4/196 (2%)
 Frame = +3

Query: 3   PESLWENAPHPIKAKIADGSEIKLDRIVKDLVVFFAGERFIIHETYQQEIGIDFLLGNNF 182
           PE  W NA  PI  KIADGS I + ++ KD+ +  AGE F I   YQQE GIDF++GNNF
Sbjct: 59  PEEHWVNAERPIMVKIADGSSITISKVCKDIDLIIAGEIFRIPTVYQQESGIDFIIGNNF 118

Query: 183 CQQYEPLVQYTDRIYLRKKNDYNGKLETILIQKRQVAYQRGLPGFLESRKNLSKKHSPEP 362
           CQ YEP +Q+TDR+   K   Y      + I K   A + G  GFLES K  SK   PEP
Sbjct: 119 CQLYEPFIQFTDRVIFTKNKSY-----PVHIAKLTRAVRVGTEGFLESMKKRSKTQQPEP 173

Query: 363 INITPQKTES----VSTFLEGGKVNITEQVFLSNLNKIGKIKDLLKQVCSENPLDPEKTK 530
           +NI+  K E+    ++   EG +++  E++F++   ++ KI++LL++VCSENPLDP KTK
Sbjct: 174 VNISTNKIENPLEEIAILSEGRRLS-EEKLFITQ-QRMQKIEELLEKVCSENPLDPNKTK 231

Query: 531 KWMKASIKLIEPGKFV 578
           +WMKASIKL +P K +
Sbjct: 232 QWMKASIKLSDPSKAI 247


>gb|AFI61742.1| reverse transcriptase [Cauliflower mosaic virus]
          Length = 679

 Score =  176 bits (446), Expect = 3e-42
 Identities = 93/195 (47%), Positives = 122/195 (62%), Gaps = 3/195 (1%)
 Frame = +3

Query: 3   PESLWENAPHPIKAKIADGSEIKLDRIVKDLVVFFAGERFIIHETYQQEIGIDFLLGNNF 182
           PE  W NA  PI  KIADGS I + ++ KD+ +  AGE F I   YQQE GIDF++GNNF
Sbjct: 59  PEEHWVNAERPIMVKIADGSSITISKVCKDIDLIIAGEIFKIPTVYQQESGIDFIIGNNF 118

Query: 183 CQQYEPLVQYTDRIYLRKKNDYNGKLETILIQKRQVAYQRGLPGFLESRKNLSKKHSPEP 362
           CQ YEP +Q+TDR+   K   Y      + I K   A + G  GFLES K  SK   PEP
Sbjct: 119 CQLYEPFIQFTDRVIFTKNKSY-----PVHIAKLTRAVRVGTEGFLESMKKRSKTQQPEP 173

Query: 363 INITPQKTESVS---TFLEGGKVNITEQVFLSNLNKIGKIKDLLKQVCSENPLDPEKTKK 533
           +NI+  K E+       L  G+    E++F++   ++ KI++LL++VCSENPLDP KTK+
Sbjct: 174 VNISTNKIENPKEEIAILSEGRRLAEEKLFITQ-QRMQKIEELLEKVCSENPLDPNKTKQ 232

Query: 534 WMKASIKLIEPGKFV 578
           WMKASIKL +P K +
Sbjct: 233 WMKASIKLSDPSKAI 247


>ref|YP_006907834.1| polyprotein [Horseradish latent virus] gi|57790326|gb|AAW56089.1|
           polyprotein [Horseradish latent virus]
          Length = 679

 Score =  176 bits (445), Expect = 3e-42
 Identities = 93/193 (48%), Positives = 126/193 (65%), Gaps = 1/193 (0%)
 Frame = +3

Query: 3   PESLWENAPHPIKAKIADGSEIKLDRIVKDLVVFFAGERFIIHETYQQEIGIDFLLGNNF 182
           PE  WE AP  I  KIA+ S I LD+I ++L +  AGERF I   +QQE GIDF++GNNF
Sbjct: 67  PEERWEAAPRKINVKIANESTITLDKICRNLDIIIAGERFHIDVVFQQESGIDFIIGNNF 126

Query: 183 CQQYEPLVQYTDRIYLRKKNDYNGKLETILIQKRQVAYQRGLPGFLESRKNLSKKHSPEP 362
           CQ+Y P +Q+T  I    K+ Y      + I K + A++RG+PGFLES K  S    PEP
Sbjct: 127 CQEYSPFIQFTGHIVFTMKDQYQ-----VPITKLRRAFKRGIPGFLESMKKRSTAQQPEP 181

Query: 363 INITPQKTESVSTFLE-GGKVNITEQVFLSNLNKIGKIKDLLKQVCSENPLDPEKTKKWM 539
           +NI+  KT S+S     G K+ IT++       ++ KI++LL++VCSENPLDPEK+K WM
Sbjct: 182 LNISTNKTVSLSRGRRFGEKLRITQE-------RMVKIEELLEKVCSENPLDPEKSKGWM 234

Query: 540 KASIKLIEPGKFV 578
           +ASIKL +P K +
Sbjct: 235 QASIKLSDPTKVI 247