BLASTX nr result

ID: Scutellaria22_contig00032148 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00032148
         (640 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004166129.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain...   277   1e-72
ref|XP_004140512.1| PREDICTED: chromodomain-helicase-DNA-binding...   277   1e-72
ref|XP_002326828.1| chromatin remodeling complex subunit [Populu...   267   1e-69
ref|XP_002274161.2| PREDICTED: chromodomain-helicase-DNA-binding...   259   2e-67
emb|CBI16626.3| unnamed protein product [Vitis vinifera]              259   2e-67

>ref|XP_004166129.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
            protein 1-like [Cucumis sativus]
          Length = 867

 Score =  277 bits (708), Expect = 1e-72
 Identities = 137/206 (66%), Positives = 163/206 (79%), Gaps = 11/206 (5%)
 Frame = -1

Query: 598  LSKWEALGYHSLSVSNPVSPANQDVMSDSGTVHFVYGDCTNTEAVSS--SEPTIIFSCVD 425
            LSKWEALGYHSLSV +P+ P + D++SD+G+V+FVYGDCT+  A  +  SEPTIIFSCVD
Sbjct: 662  LSKWEALGYHSLSVEDPILPNDGDLISDAGSVYFVYGDCTHPSATVNCISEPTIIFSCVD 721

Query: 424  NSGNWGHGGMFDALARLSAAIPNAYEQASEFGDLHLDD---------HGEPSNHTNARRW 272
            +SG+WGHGGMF ALA+LS ++P+AYE+ASEFGDLHL D           E S   NA +W
Sbjct: 722  DSGSWGHGGMFGALAKLSESVPSAYERASEFGDLHLGDLHLIKLGIISKEQSTSDNAPQW 781

Query: 271  VALAVVQSYNQRRKVPRSSISTSDLEVCLAKTSFSAAQYSASIHMPRINYQHGTDRSEWY 92
            VALAVVQSYN RRKVPRS IS  DLE C++K S SAA++SASIHMPRI YQ G+DRSEWY
Sbjct: 782  VALAVVQSYNPRRKVPRSKISLPDLENCISKASSSAAKHSASIHMPRIGYQDGSDRSEWY 841

Query: 91   AVERLLRKYAGMYGINIYVYYYRRAT 14
             VERLLRKYA +Y + IYVYYYRR +
Sbjct: 842  TVERLLRKYASIYNVKIYVYYYRRTS 867


>ref|XP_004140512.1| PREDICTED: chromodomain-helicase-DNA-binding protein 1-like [Cucumis
            sativus]
          Length = 868

 Score =  277 bits (708), Expect = 1e-72
 Identities = 137/206 (66%), Positives = 163/206 (79%), Gaps = 11/206 (5%)
 Frame = -1

Query: 598  LSKWEALGYHSLSVSNPVSPANQDVMSDSGTVHFVYGDCTNTEAVSS--SEPTIIFSCVD 425
            LSKWEALGYHSLSV +P+ P + D++SD+G+V+FVYGDCT+  A  +  SEPTIIFSCVD
Sbjct: 663  LSKWEALGYHSLSVEDPILPNDGDLISDAGSVYFVYGDCTHPSATVNCISEPTIIFSCVD 722

Query: 424  NSGNWGHGGMFDALARLSAAIPNAYEQASEFGDLHLDD---------HGEPSNHTNARRW 272
            +SG+WGHGGMF ALA+LS ++P+AYE+ASEFGDLHL D           E S   NA +W
Sbjct: 723  DSGSWGHGGMFGALAKLSESVPSAYERASEFGDLHLGDLHLIKLGIISKEQSTSDNAPQW 782

Query: 271  VALAVVQSYNQRRKVPRSSISTSDLEVCLAKTSFSAAQYSASIHMPRINYQHGTDRSEWY 92
            VALAVVQSYN RRKVPRS IS  DLE C++K S SAA++SASIHMPRI YQ G+DRSEWY
Sbjct: 783  VALAVVQSYNPRRKVPRSKISLPDLENCISKASSSAAKHSASIHMPRIGYQDGSDRSEWY 842

Query: 91   AVERLLRKYAGMYGINIYVYYYRRAT 14
             VERLLRKYA +Y + IYVYYYRR +
Sbjct: 843  TVERLLRKYASIYNVKIYVYYYRRTS 868


>ref|XP_002326828.1| chromatin remodeling complex subunit [Populus trichocarpa]
            gi|222835143|gb|EEE73578.1| chromatin remodeling complex
            subunit [Populus trichocarpa]
          Length = 866

 Score =  267 bits (683), Expect = 1e-69
 Identities = 133/197 (67%), Positives = 155/197 (78%), Gaps = 9/197 (4%)
 Frame = -1

Query: 598  LSKWEALGYHSLSVSNPVSPANQDVMSDSGTVHFVYGDCTNTEAVSSSEPTIIFSCVDNS 419
            LSKWEALGYHSLSV +P+ P + D +SDSG VHFV GDCT+ + + SSEP++IFSCVD S
Sbjct: 670  LSKWEALGYHSLSVGDPIYPVDGDALSDSGFVHFVVGDCTHPDKLCSSEPSVIFSCVDES 729

Query: 418  GNWGHGGMFDALARLSAAIPNAYEQASEFGDLHLDD--------HGEPSN-HTNARRWVA 266
            GNWGHGGMFDALA+LS++IP AY+QASEF DLHL D        + +  N   +  RWVA
Sbjct: 730  GNWGHGGMFDALAKLSSSIPAAYQQASEFRDLHLGDVHLVKIIENTDGQNMEGDTPRWVA 789

Query: 265  LAVVQSYNQRRKVPRSSISTSDLEVCLAKTSFSAAQYSASIHMPRINYQHGTDRSEWYAV 86
            LAVVQSYN RRKVPRS IS  DLE CL+K SF+AAQ SASIHMPRI YQ GTDRS+WY V
Sbjct: 790  LAVVQSYNPRRKVPRSEISIPDLEACLSKASFAAAQNSASIHMPRIGYQDGTDRSQWYTV 849

Query: 85   ERLLRKYAGMYGINIYV 35
            ERLLRKYA ++GI I+V
Sbjct: 850  ERLLRKYASVFGIKIHV 866


>ref|XP_002274161.2| PREDICTED: chromodomain-helicase-DNA-binding protein 1-like [Vitis
            vinifera]
          Length = 876

 Score =  259 bits (663), Expect = 2e-67
 Identities = 133/204 (65%), Positives = 157/204 (76%), Gaps = 9/204 (4%)
 Frame = -1

Query: 598  LSKWEALGYHSLSVSNPVSPANQDVMSDSGTVHFVYGDCTNTEAVSSSEPTIIFSCVDNS 419
            L+KWEA GY+SLSV +P S  + D++SDSG+V FVYGDCT    V  SE TIIFSC+D+S
Sbjct: 676  LAKWEAHGYNSLSVKDPPSHVDVDMISDSGSVDFVYGDCTLPSKVCPSEATIIFSCIDDS 735

Query: 418  GNWGHGGMFDALARLSAAIPNAYEQASEFGDLHL---------DDHGEPSNHTNARRWVA 266
            G WGHGGMFDALARLS+++P+AY++ASEF DLHL         +D  E     NA +WVA
Sbjct: 736  GIWGHGGMFDALARLSSSVPDAYQRASEFKDLHLGDLHFIKINEDCEEQRMDCNAPQWVA 795

Query: 265  LAVVQSYNQRRKVPRSSISTSDLEVCLAKTSFSAAQYSASIHMPRINYQHGTDRSEWYAV 86
            LAVVQSYN RRKVPRS+IS  DLE CL+K SF AAQ SASIHMPRI YQ   DRSEWY V
Sbjct: 796  LAVVQSYNPRRKVPRSNISVPDLECCLSKASFLAAQKSASIHMPRIGYQ---DRSEWYTV 852

Query: 85   ERLLRKYAGMYGINIYVYYYRRAT 14
            ERLLRKYA +YGI I+VYY+RR++
Sbjct: 853  ERLLRKYASLYGIKIFVYYFRRSS 876


>emb|CBI16626.3| unnamed protein product [Vitis vinifera]
          Length = 832

 Score =  259 bits (663), Expect = 2e-67
 Identities = 133/204 (65%), Positives = 157/204 (76%), Gaps = 9/204 (4%)
 Frame = -1

Query: 598  LSKWEALGYHSLSVSNPVSPANQDVMSDSGTVHFVYGDCTNTEAVSSSEPTIIFSCVDNS 419
            L+KWEA GY+SLSV +P S  + D++SDSG+V FVYGDCT    V  SE TIIFSC+D+S
Sbjct: 632  LAKWEAHGYNSLSVKDPPSHVDVDMISDSGSVDFVYGDCTLPSKVCPSEATIIFSCIDDS 691

Query: 418  GNWGHGGMFDALARLSAAIPNAYEQASEFGDLHL---------DDHGEPSNHTNARRWVA 266
            G WGHGGMFDALARLS+++P+AY++ASEF DLHL         +D  E     NA +WVA
Sbjct: 692  GIWGHGGMFDALARLSSSVPDAYQRASEFKDLHLGDLHFIKINEDCEEQRMDCNAPQWVA 751

Query: 265  LAVVQSYNQRRKVPRSSISTSDLEVCLAKTSFSAAQYSASIHMPRINYQHGTDRSEWYAV 86
            LAVVQSYN RRKVPRS+IS  DLE CL+K SF AAQ SASIHMPRI YQ   DRSEWY V
Sbjct: 752  LAVVQSYNPRRKVPRSNISVPDLECCLSKASFLAAQKSASIHMPRIGYQ---DRSEWYTV 808

Query: 85   ERLLRKYAGMYGINIYVYYYRRAT 14
            ERLLRKYA +YGI I+VYY+RR++
Sbjct: 809  ERLLRKYASLYGIKIFVYYFRRSS 832


Top