BLASTX nr result

ID: Scutellaria22_contig00031774 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00031774
         (210 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004165748.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...   140   1e-31
ref|XP_004136744.1| PREDICTED: DNA-directed RNA polymerase I sub...   140   1e-31
gb|ACJ63313.1| RNA polymerase I large subunit [Drimys winteri]        137   7e-31
emb|CBI29879.3| unnamed protein product [Vitis vinifera]              136   2e-30
ref|XP_002277555.1| PREDICTED: DNA-directed RNA polymerase I sub...   136   2e-30

>ref|XP_004165748.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase I subunit
            RPA1-like [Cucumis sativus]
          Length = 1652

 Score =  140 bits (352), Expect = 1e-31
 Identities = 63/69 (91%), Positives = 67/69 (97%)
 Frame = -3

Query: 208  WDFTSRAGGFITDRFLTGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLVKNLESLK 29
            WD+ SRAGGFI DRFLTGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCL+KNLESLK
Sbjct: 962  WDWASRAGGFIVDRFLTGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLESLK 1021

Query: 28   VCYDYTVRD 2
            +CYD+TVRD
Sbjct: 1022 ICYDHTVRD 1030


>ref|XP_004136744.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA1-like [Cucumis
            sativus]
          Length = 1650

 Score =  140 bits (352), Expect = 1e-31
 Identities = 63/69 (91%), Positives = 67/69 (97%)
 Frame = -3

Query: 208  WDFTSRAGGFITDRFLTGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLVKNLESLK 29
            WD+ SRAGGFI DRFLTGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCL+KNLESLK
Sbjct: 959  WDWASRAGGFIVDRFLTGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLESLK 1018

Query: 28   VCYDYTVRD 2
            +CYD+TVRD
Sbjct: 1019 ICYDHTVRD 1027


>gb|ACJ63313.1| RNA polymerase I large subunit [Drimys winteri]
          Length = 539

 Score =  137 bits (346), Expect = 7e-31
 Identities = 62/69 (89%), Positives = 67/69 (97%)
 Frame = -3

Query: 208 WDFTSRAGGFITDRFLTGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLVKNLESLK 29
           WD  SRAGGFI+DRFL+GLRPQEYYFHCMAGREGLVDTA+KTSRSGYLQRCL+KNLESLK
Sbjct: 350 WDCASRAGGFISDRFLSGLRPQEYYFHCMAGREGLVDTAIKTSRSGYLQRCLIKNLESLK 409

Query: 28  VCYDYTVRD 2
           VCYD+TVRD
Sbjct: 410 VCYDHTVRD 418


>emb|CBI29879.3| unnamed protein product [Vitis vinifera]
          Length = 1669

 Score =  136 bits (343), Expect = 2e-30
 Identities = 62/69 (89%), Positives = 65/69 (94%)
 Frame = -3

Query: 208  WDFTSRAGGFITDRFLTGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLVKNLESLK 29
            WD  +RAGGFI+DRFLTGL PQEYYFHCMAGREGLVDTAVKTSRSGYLQRCL+KNLE LK
Sbjct: 979  WDCAARAGGFISDRFLTGLHPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLECLK 1038

Query: 28   VCYDYTVRD 2
            VCYDYTVRD
Sbjct: 1039 VCYDYTVRD 1047


>ref|XP_002277555.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA1-like [Vitis
            vinifera]
          Length = 1740

 Score =  136 bits (343), Expect = 2e-30
 Identities = 62/69 (89%), Positives = 65/69 (94%)
 Frame = -3

Query: 208  WDFTSRAGGFITDRFLTGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLVKNLESLK 29
            WD  +RAGGFI+DRFLTGL PQEYYFHCMAGREGLVDTAVKTSRSGYLQRCL+KNLE LK
Sbjct: 1050 WDCAARAGGFISDRFLTGLHPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLECLK 1109

Query: 28   VCYDYTVRD 2
            VCYDYTVRD
Sbjct: 1110 VCYDYTVRD 1118


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