BLASTX nr result

ID: Scutellaria22_contig00031417 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00031417
         (849 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAL79762.1|AC096687_26 putative polyprotein [Oryza sativa Jap...    62   1e-09
gb|AAK82434.1|AC091247_1 putative polyprotein, 5'-partial [Oryza...    62   1e-09
emb|CAN80132.1| hypothetical protein VITISV_012031 [Vitis vinifera]    64   3e-09
gb|AAX62221.1| reverse transcriptase [Cycas revoluta]                  68   3e-09
ref|XP_004172376.1| PREDICTED: uncharacterized protein LOC101223...    67   4e-09

>gb|AAL79762.1|AC096687_26 putative polyprotein [Oryza sativa Japonica Group]
           gi|108711868|gb|ABF99663.1| retrotransposon protein,
           putative, unclassified [Oryza sativa Japonica Group]
          Length = 1087

 Score = 62.0 bits (149), Expect(2) = 1e-09
 Identities = 35/90 (38%), Positives = 52/90 (57%), Gaps = 2/90 (2%)
 Frame = -2

Query: 509 MGVQMIHELVIV--FTMIDVTSSYHQSTRYIYN*KTSMRLLFIRTRNTIKFFVMPFHFTN 336
           +G +++ EL     F+ +D+ S YHQ     ++     +  F       +F VMPF  TN
Sbjct: 688 IGDELLDELAGTKYFSKLDLRSGYHQIRMLEFD---EYKTAFKTHHGHFQFRVMPFGLTN 744

Query: 335 APETFQYLMNKVFQPYLSEFVLVFLYDILM 246
           AP TFQ LMN +F P+L +FVL+F+ DIL+
Sbjct: 745 APATFQCLMNSIFAPFLRKFVLLFMDDILI 774



 Score = 27.3 bits (59), Expect(2) = 1e-09
 Identities = 13/27 (48%), Positives = 18/27 (66%)
 Frame = -3

Query: 601 YNQTQKDGIERMVREMLTVQLGSVNVS 521
           Y+  QKD IER V EML+ +L + + S
Sbjct: 624 YSPAQKDEIERQVSEMLSARLITTSCS 650


>gb|AAK82434.1|AC091247_1 putative polyprotein, 5'-partial [Oryza sativa Japonica Group]
          Length = 799

 Score = 62.0 bits (149), Expect(2) = 1e-09
 Identities = 35/90 (38%), Positives = 52/90 (57%), Gaps = 2/90 (2%)
 Frame = -2

Query: 509 MGVQMIHELVIV--FTMIDVTSSYHQSTRYIYN*KTSMRLLFIRTRNTIKFFVMPFHFTN 336
           +G +++ EL     F+ +D+ S YHQ     ++     +  F       +F VMPF  TN
Sbjct: 400 IGDELLDELAGTKYFSKLDLRSGYHQIRMLEFD---EYKTAFKTHHGHFQFRVMPFGLTN 456

Query: 335 APETFQYLMNKVFQPYLSEFVLVFLYDILM 246
           AP TFQ LMN +F P+L +FVL+F+ DIL+
Sbjct: 457 APATFQCLMNSIFAPFLRKFVLLFMDDILI 486



 Score = 27.3 bits (59), Expect(2) = 1e-09
 Identities = 13/27 (48%), Positives = 18/27 (66%)
 Frame = -3

Query: 601 YNQTQKDGIERMVREMLTVQLGSVNVS 521
           Y+  QKD IER V EML+ +L + + S
Sbjct: 336 YSPAQKDEIERQVSEMLSARLITTSCS 362


>emb|CAN80132.1| hypothetical protein VITISV_012031 [Vitis vinifera]
          Length = 1371

 Score = 63.5 bits (153), Expect(3) = 3e-09
 Identities = 38/98 (38%), Positives = 54/98 (55%), Gaps = 6/98 (6%)
 Frame = -2

Query: 521 LRRKMGVQMIHELV------IVFTMIDVTSSYHQSTRYIYN*KTSMRLLFIRTRNTIKFF 360
           ++ K  + +I EL+       +F+ ID+ S Y Q   +  +     +  F       +F 
Sbjct: 661 VKDKFPIPVIEELLEELGGSTIFSKIDLRSGYWQIRMHEPD---VPKTAFKTHEGHYEFL 717

Query: 359 VMPFHFTNAPETFQYLMNKVFQPYLSEFVLVFLYDILM 246
           VMPF  TNAP TFQ LMN +FQPYL +F+LVF  DIL+
Sbjct: 718 VMPFGLTNAPSTFQSLMNNIFQPYLRKFILVFFDDILI 755



 Score = 23.1 bits (48), Expect(3) = 3e-09
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -3

Query: 601 YNQTQKDGIERMVREML 551
           Y   QKD IE+++ EML
Sbjct: 605 YAAVQKDAIEKLIGEML 621



 Score = 20.4 bits (41), Expect(3) = 3e-09
 Identities = 8/10 (80%), Positives = 10/10 (100%)
 Frame = -1

Query: 531 LMLVKKKDGS 502
           ++LVKKKDGS
Sbjct: 637 VVLVKKKDGS 646


>gb|AAX62221.1| reverse transcriptase [Cycas revoluta]
          Length = 115

 Score = 67.8 bits (164), Expect = 3e-09
 Identities = 40/101 (39%), Positives = 56/101 (55%), Gaps = 6/101 (5%)
 Frame = -2

Query: 521 LRRKMGVQMIHELV------IVFTMIDVTSSYHQSTRYIYN*KTSMRLLFIRTRNTIKFF 360
           ++ K  + +I EL+      + FT +D+ S YHQ        K   +  F       +F 
Sbjct: 18  IKDKFPIPVIDELLDELHGAMFFTSLDLRSGYHQIR---IKAKDVHKTAFRTHEGHYEFL 74

Query: 359 VMPFHFTNAPETFQYLMNKVFQPYLSEFVLVFLYDILM*GG 237
           VMPF  TNAP TFQ LMNK+F+PYL +F+LVF  D+L+  G
Sbjct: 75  VMPFGLTNAPSTFQGLMNKLFRPYLRKFILVFFDDLLIFSG 115


>ref|XP_004172376.1| PREDICTED: uncharacterized protein LOC101223371 [Cucumis sativus]
          Length = 943

 Score = 67.4 bits (163), Expect = 4e-09
 Identities = 42/91 (46%), Positives = 54/91 (59%), Gaps = 5/91 (5%)
 Frame = -2

Query: 503 VQMIHEL--VIVFTMIDVTSSYHQ---STRYIYN*KTSMRLLFIRTRNTIKFFVMPFHFT 339
           +++  EL    +FT ID+ S YHQ    T +I   KT+ R          +F VMPF  T
Sbjct: 638 IELFDELNGATIFTKIDLKSGYHQIRMCTDHIE--KTTFRT----HEGHYEFMVMPFGLT 691

Query: 338 NAPETFQYLMNKVFQPYLSEFVLVFLYDILM 246
           NAP TFQ LMN +F+PYL +FVLVF  DIL+
Sbjct: 692 NAPSTFQSLMNTIFRPYLRKFVLVFFDDILI 722


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