BLASTX nr result

ID: Scutellaria22_contig00031088 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00031088
         (295 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAL15053.1| glutamate receptor 2.6 [Solanum lycopersicum]          98   8e-19
ref|XP_003603256.1| Glutamate receptor 2.8 [Medicago truncatula]...    97   1e-18
ref|XP_002308726.1| glutamate-gated kainate-type ion channel rec...    96   4e-18
ref|XP_002324361.1| glutamate-gated kainate-type ion channel rec...    94   9e-18
ref|XP_002308723.1| glutamate-gated kainate-type ion channel rec...    94   9e-18

>dbj|BAL15053.1| glutamate receptor 2.6 [Solanum lycopersicum]
          Length = 908

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 44/85 (51%), Positives = 66/85 (77%)
 Frame = -1

Query: 256 FPKGSPLVADISRAILNVTQSETMMKIEKQWFGDDSKCLESVNLFTSHSLGLDSFRGLFL 77
           FP GSPLV D+SRA+LNVT+ E M++IE+ WFG+ S C +  +  +S+SLGLDSF GLF+
Sbjct: 722 FPIGSPLVPDVSRAVLNVTEGEKMVQIERAWFGE-STCSDLSSSLSSNSLGLDSFWGLFV 780

Query: 76  VVGIAAISAFIIHVIRFLHQNWHVM 2
           V  +AA+ A +I + +F+H++WH++
Sbjct: 781 VAVVAAVLALVIFLTKFIHEHWHII 805


>ref|XP_003603256.1| Glutamate receptor 2.8 [Medicago truncatula]
            gi|355492304|gb|AES73507.1| Glutamate receptor 2.8
            [Medicago truncatula]
          Length = 990

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 50/85 (58%), Positives = 65/85 (76%), Gaps = 1/85 (1%)
 Frame = -1

Query: 256  FPKGSPLVADISRAILNVTQSETMMKIEKQWFGDDSKCLES-VNLFTSHSLGLDSFRGLF 80
            FPKGSPLVADISRAILNVTQ   M  IE  WF  +S+CL+S   + +++SLGL+SF GLF
Sbjct: 799  FPKGSPLVADISRAILNVTQGGKMRTIENAWF-KESRCLDSNTEISSNNSLGLESFWGLF 857

Query: 79   LVVGIAAISAFIIHVIRFLHQNWHV 5
            L+ GIA++ A +I V+ FLHQ+ H+
Sbjct: 858  LIAGIASLLALLIFVVTFLHQHKHI 882


>ref|XP_002308726.1| glutamate-gated kainate-type ion channel receptor subunit GluR5
           [Populus trichocarpa] gi|222854702|gb|EEE92249.1|
           glutamate-gated kainate-type ion channel receptor
           subunit GluR5 [Populus trichocarpa]
          Length = 324

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 47/86 (54%), Positives = 64/86 (74%)
 Frame = -1

Query: 259 VFPKGSPLVADISRAILNVTQSETMMKIEKQWFGDDSKCLESVNLFTSHSLGLDSFRGLF 80
           VFPKGSPLV DISRAILNVT+ + M +IE  WFG +S C ES +  +S+SL L SF GLF
Sbjct: 152 VFPKGSPLVPDISRAILNVTEGDEMKQIEGAWFGKNSTCPESGSSISSNSLSLKSFWGLF 211

Query: 79  LVVGIAAISAFIIHVIRFLHQNWHVM 2
           L+ G+AA+ A II ++ F+++  +V+
Sbjct: 212 LIAGLAALLALIIFIVMFVYRERNVL 237


>ref|XP_002324361.1| glutamate-gated kainate-type ion channel receptor subunit GluR5
            [Populus trichocarpa] gi|222865795|gb|EEF02926.1|
            glutamate-gated kainate-type ion channel receptor subunit
            GluR5 [Populus trichocarpa]
          Length = 856

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 44/79 (55%), Positives = 59/79 (74%)
 Frame = -1

Query: 259  VFPKGSPLVADISRAILNVTQSETMMKIEKQWFGDDSKCLESVNLFTSHSLGLDSFRGLF 80
            VFPKGSPLV D+SRAILNVT+ + M +I   WFG  S C +S  L +S+SL L SF GLF
Sbjct: 778  VFPKGSPLVPDVSRAILNVTEEDKMKQIADAWFGKQSSCPDSSTLISSNSLSLKSFGGLF 837

Query: 79   LVVGIAAISAFIIHVIRFL 23
            L+ GIA++SA +I +++F+
Sbjct: 838  LIAGIASLSALLIFIVKFV 856


>ref|XP_002308723.1| glutamate-gated kainate-type ion channel receptor subunit GluR5
            [Populus trichocarpa] gi|222854699|gb|EEE92246.1|
            glutamate-gated kainate-type ion channel receptor subunit
            GluR5 [Populus trichocarpa]
          Length = 866

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 47/86 (54%), Positives = 63/86 (73%)
 Frame = -1

Query: 259  VFPKGSPLVADISRAILNVTQSETMMKIEKQWFGDDSKCLESVNLFTSHSLGLDSFRGLF 80
            VFPKGSPLV DISRAILNVT+ + M +IE  WFG  S C ES +  +S+SL L SF GLF
Sbjct: 758  VFPKGSPLVPDISRAILNVTEGDEMKQIEGAWFGKKSTCPESSSSISSNSLSLKSFWGLF 817

Query: 79   LVVGIAAISAFIIHVIRFLHQNWHVM 2
            L+ G+AA+ A II ++ F+++  +V+
Sbjct: 818  LLAGLAALLALIIFIVMFVYRERNVL 843


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