BLASTX nr result

ID: Scutellaria22_contig00030829 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00030829
         (304 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282063.1| PREDICTED: pentatricopeptide repeat-containi...   111   7e-23
ref|XP_003525932.1| PREDICTED: pentatricopeptide repeat-containi...   103   2e-20
ref|XP_004152427.1| PREDICTED: pentatricopeptide repeat-containi...    96   2e-18
ref|XP_004170773.1| PREDICTED: pentatricopeptide repeat-containi...    93   2e-17
ref|XP_002526196.1| pentatricopeptide repeat-containing protein,...    77   1e-12

>ref|XP_002282063.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Vitis vinifera]
          Length = 533

 Score =  111 bits (277), Expect = 7e-23
 Identities = 55/98 (56%), Positives = 70/98 (71%)
 Frame = +3

Query: 9   LNQLKQIHAYLVKNPFFRTSAAVTSVLSFAATSADPGFFSYACALFHNLRRRTTFLYNSM 188
           L+QLKQIHA L+++    +  A+  +LS AATS +P FFS+AC +F NL  R  F+YNSM
Sbjct: 24  LSQLKQIHANLLQSHLPESPFAIGQLLSLAATSNNPSFFSHACLIFQNLSLRNIFMYNSM 83

Query: 189 IRGFVKSNQPIDAISCYKDMLRDGLIKNNYTFTPLVKA 302
           IRG+V S+ P  AI CY DML  GL+ NNYTF PL+KA
Sbjct: 84  IRGYVLSHSPTRAILCYLDMLNYGLLANNYTFPPLIKA 121


>ref|XP_003525932.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Glycine max]
          Length = 526

 Score =  103 bits (256), Expect = 2e-20
 Identities = 48/99 (48%), Positives = 70/99 (70%)
 Frame = +3

Query: 6   TLNQLKQIHAYLVKNPFFRTSAAVTSVLSFAATSADPGFFSYACALFHNLRRRTTFLYNS 185
           TL QLKQ+HA++++     T  A+  +LS  ATS D  FFSYA ++F +L  R TF++N+
Sbjct: 17  TLTQLKQLHAHILRCRINDTPYALAPLLSVLATSNDASFFSYARSIFRHLTNRNTFMHNT 76

Query: 186 MIRGFVKSNQPIDAISCYKDMLRDGLIKNNYTFTPLVKA 302
           MIRG+++   P+ A+SCY  ML++G+  NNYTF PL+KA
Sbjct: 77  MIRGYLQCRSPLHAVSCYLSMLQNGVAVNNYTFPPLIKA 115


>ref|XP_004152427.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Cucumis sativus]
          Length = 528

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 48/102 (47%), Positives = 66/102 (64%), Gaps = 2/102 (1%)
 Frame = +3

Query: 3   ETLNQLKQIHAYLVKNPFFRTSAAVTSVLSFAATSA--DPGFFSYACALFHNLRRRTTFL 176
           +++  LKQIHA+L+K    ++  A+  +L  AATS      FFSYAC +F NL++R  F+
Sbjct: 18  KSVQHLKQIHAHLLKTYLSQSPYAIAPLLEVAATSGCDRDSFFSYACGIFKNLQQRNIFM 77

Query: 177 YNSMIRGFVKSNQPIDAISCYKDMLRDGLIKNNYTFTPLVKA 302
           YNSMIRG+  S  P  AI CY D++  G + N YTF PL+KA
Sbjct: 78  YNSMIRGYFLSRFPKQAILCYLDLMDRGFLANKYTFPPLIKA 119


>ref|XP_004170773.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Cucumis sativus]
          Length = 487

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 47/102 (46%), Positives = 65/102 (63%), Gaps = 2/102 (1%)
 Frame = +3

Query: 3   ETLNQLKQIHAYLVKNPFFRTSAAVTSVLSFAATSA--DPGFFSYACALFHNLRRRTTFL 176
           +++  LKQIHA+L+     ++  A+  +L  AATS      FFSYAC +F NL++R  F+
Sbjct: 18  KSVQHLKQIHAHLLMTYLPQSPYAIAPLLEVAATSGCDRDSFFSYACGIFKNLQQRNIFM 77

Query: 177 YNSMIRGFVKSNQPIDAISCYKDMLRDGLIKNNYTFTPLVKA 302
           YNSMIRG+  S  P  AI CY D++  G + N YTF PL+KA
Sbjct: 78  YNSMIRGYFLSRFPKQAILCYLDLMDRGFLANKYTFPPLIKA 119


>ref|XP_002526196.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223534500|gb|EEF36200.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 491

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 38/99 (38%), Positives = 61/99 (61%)
 Frame = +3

Query: 6   TLNQLKQIHAYLVKNPFFRTSAAVTSVLSFAATSADPGFFSYACALFHNLRRRTTFLYNS 185
           T++Q+KQI  +L  +   +   A   ++SF A S++    S+A  LF  LR R+TF++N+
Sbjct: 22  TISQIKQIQTHLTVSGTLKDPYAAAKIISFCALSSNQFSLSHAYRLFLGLRHRSTFIWNT 81

Query: 186 MIRGFVKSNQPIDAISCYKDMLRDGLIKNNYTFTPLVKA 302
           +IR F + N+P  AI  +K+ML    + NNYT++ L KA
Sbjct: 82  VIRAFAEKNEPRKAIMLFKNMLYSNFLPNNYTYSFLFKA 120


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