BLASTX nr result

ID: Scutellaria22_contig00030679 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00030679
         (235 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279168.1| PREDICTED: pentatricopeptide repeat-containi...   135   3e-30
ref|XP_002887681.1| binding protein [Arabidopsis lyrata subsp. l...   134   8e-30
ref|NP_177865.2| pentatricopeptide repeat-containing protein [Ar...   134   8e-30
ref|XP_002520332.1| pentatricopeptide repeat-containing protein,...   134   1e-29
ref|XP_004149831.1| PREDICTED: pentatricopeptide repeat-containi...   130   1e-28

>ref|XP_002279168.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g77405-like [Vitis vinifera]
          Length = 432

 Score =  135 bits (341), Expect = 3e-30
 Identities = 60/78 (76%), Positives = 71/78 (91%)
 Frame = -1

Query: 235 FTYTILISCYIRYAMETGSRKAIRRRVWEANHLFRLMIFKGFVPDVVTYNCLINGCCKTN 56
           FTYTILI  Y +Y+++TG RKA+RRR+WEANHLFR+M+FKGFVPDVVTYNCLI+GCCKT 
Sbjct: 230 FTYTILIGSYCKYSLQTGCRKAVRRRLWEANHLFRIMLFKGFVPDVVTYNCLIDGCCKTY 289

Query: 55  RIGRALEVFNDMLKRGCV 2
           RI RALE+F+DM KRGCV
Sbjct: 290 RIERALELFDDMNKRGCV 307


>ref|XP_002887681.1| binding protein [Arabidopsis lyrata subsp. lyrata]
           gi|297333522|gb|EFH63940.1| binding protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 459

 Score =  134 bits (337), Expect = 8e-30
 Identities = 60/78 (76%), Positives = 69/78 (88%)
 Frame = -1

Query: 235 FTYTILISCYIRYAMETGSRKAIRRRVWEANHLFRLMIFKGFVPDVVTYNCLINGCCKTN 56
           +TYTILIS Y RY M+TG RKAIRRR+WEAN +FR M+F+GFVPDVVTYNCLI+GCCKTN
Sbjct: 238 YTYTILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPDVVTYNCLIDGCCKTN 297

Query: 55  RIGRALEVFNDMLKRGCV 2
           RIGRALE+F DM  +GCV
Sbjct: 298 RIGRALELFEDMKTKGCV 315


>ref|NP_177865.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|122244095|sp|Q1PFC5.1|PP130_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At1g77405 gi|91806103|gb|ABE65780.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
           gi|332197853|gb|AEE35974.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 458

 Score =  134 bits (337), Expect = 8e-30
 Identities = 60/78 (76%), Positives = 69/78 (88%)
 Frame = -1

Query: 235 FTYTILISCYIRYAMETGSRKAIRRRVWEANHLFRLMIFKGFVPDVVTYNCLINGCCKTN 56
           +TYTILIS Y RY M+TG RKAIRRR+WEAN +FR M+F+GFVPDVVTYNCLI+GCCKTN
Sbjct: 238 YTYTILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPDVVTYNCLIDGCCKTN 297

Query: 55  RIGRALEVFNDMLKRGCV 2
           RIGRALE+F DM  +GCV
Sbjct: 298 RIGRALELFEDMKTKGCV 315


>ref|XP_002520332.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223540551|gb|EEF42118.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 441

 Score =  134 bits (336), Expect = 1e-29
 Identities = 59/78 (75%), Positives = 70/78 (89%)
 Frame = -1

Query: 235 FTYTILISCYIRYAMETGSRKAIRRRVWEANHLFRLMIFKGFVPDVVTYNCLINGCCKTN 56
           FTYTI+IS Y +Y+++TG RKAIRRR+WEANHLFR+M+FKGF PDVVTYNCLI+GCCKT 
Sbjct: 239 FTYTIMISSYCKYSLQTGCRKAIRRRLWEANHLFRIMLFKGFAPDVVTYNCLIDGCCKTY 298

Query: 55  RIGRALEVFNDMLKRGCV 2
           RI RALE+F DM +RGCV
Sbjct: 299 RIERALELFEDMNRRGCV 316


>ref|XP_004149831.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g77405-like [Cucumis sativus]
           gi|449518241|ref|XP_004166151.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At1g77405-like [Cucumis sativus]
          Length = 445

 Score =  130 bits (326), Expect = 1e-28
 Identities = 59/77 (76%), Positives = 68/77 (88%)
 Frame = -1

Query: 235 FTYTILISCYIRYAMETGSRKAIRRRVWEANHLFRLMIFKGFVPDVVTYNCLINGCCKTN 56
           FTYTILIS Y +Y+++TG RKAIRRR+WEANHLFR+M+FKGF PDVVTYN LI+GCCKT 
Sbjct: 244 FTYTILISSYCKYSLQTGCRKAIRRRLWEANHLFRIMLFKGFSPDVVTYNSLIDGCCKTY 303

Query: 55  RIGRALEVFNDMLKRGC 5
           RI RALE+F DM KRGC
Sbjct: 304 RIQRALELFEDMSKRGC 320


Top