BLASTX nr result

ID: Scutellaria22_contig00029265 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00029265
         (358 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAZ40333.1| hypothetical protein [Raphanus sativus]               132   2e-29
gb|AAK94516.1| gag-pol polyprotein [Hordeum vulgare]                  104   8e-21
gb|AAK94517.1| gag-pol polyprotein [Hordeum vulgare]                  103   1e-20
emb|CAE02465.2| OSJNBa0042D13.18 [Oryza sativa Japonica Group]        102   2e-20
gb|AAX95495.1| Retrotransposon gag protein, putative [Oryza sati...   102   3e-20

>emb|CAZ40333.1| hypothetical protein [Raphanus sativus]
          Length = 785

 Score =  132 bits (333), Expect = 2e-29
 Identities = 65/112 (58%), Positives = 79/112 (70%)
 Frame = +2

Query: 8   AQLEAANNRYKSAADRGRRHLEFNVGDFVWAVLTKDRYPAHEYNKLVARKIGPVEILEKI 187
           + LE+A  +YK AAD  R  L F  GD VW  LTK+R P  +YNKL ++K+GPVE++E+I
Sbjct: 675 SHLESATTKYKLAADTKRCELIFEPGDLVWVYLTKERLPLRDYNKLKSKKLGPVEVVERI 734

Query: 188 NPNAYRLKLPSHLRTSDVFNVKHLVPFMGDNDDLDNPPDSRPNLLPEGEDDA 343
           NPN YR++LPSHLRTSDVFN+KHL PF GDNDD    PDS  N    G  DA
Sbjct: 735 NPNVYRVRLPSHLRTSDVFNIKHLSPFKGDNDD----PDSWANPSQPGGPDA 782


>gb|AAK94516.1| gag-pol polyprotein [Hordeum vulgare]
          Length = 1720

 Score =  104 bits (259), Expect = 8e-21
 Identities = 53/113 (46%), Positives = 70/113 (61%)
 Frame = +2

Query: 2    THAQLEAANNRYKSAADRGRRHLEFNVGDFVWAVLTKDRYPAHEYNKLVARKIGPVEILE 181
            T   +E  N RYK A D+GR+H+ F  GD VW  L KDR+P    +KL+ R  GP ++LE
Sbjct: 1512 TKENIERMNARYKLAGDKGRKHVVFAPGDLVWLHLRKDRFPDLRKSKLMPRAGGPFKVLE 1571

Query: 182  KINPNAYRLKLPSHLRTSDVFNVKHLVPFMGDNDDLDNPPDSRPNLLPEGEDD 340
            KIN NAYRL+LP+    S  FN+  L P++G+ D+L     SR   + EGEDD
Sbjct: 1572 KINDNAYRLELPADFGVSPTFNIADLKPYLGEEDEL----PSRTTSVQEGEDD 1620


>gb|AAK94517.1| gag-pol polyprotein [Hordeum vulgare]
          Length = 1717

 Score =  103 bits (257), Expect = 1e-20
 Identities = 53/113 (46%), Positives = 69/113 (61%)
 Frame = +2

Query: 2    THAQLEAANNRYKSAADRGRRHLEFNVGDFVWAVLTKDRYPAHEYNKLVARKIGPVEILE 181
            T   +E  N RYK A D+GR+H+ F  GD VW  L KDR+P    +KL+ R  GP ++LE
Sbjct: 1509 TKENIERMNARYKLAGDKGRKHVVFAPGDLVWLHLRKDRFPDLRKSKLMPRAGGPFKVLE 1568

Query: 182  KINPNAYRLKLPSHLRTSDVFNVKHLVPFMGDNDDLDNPPDSRPNLLPEGEDD 340
            KIN NAYRL+LP     S  FN+  L P++G+ D+L     SR   + EGEDD
Sbjct: 1569 KINDNAYRLELPXDFGVSPTFNIADLKPYLGEEDEL----PSRTTSVQEGEDD 1617


>emb|CAE02465.2| OSJNBa0042D13.18 [Oryza sativa Japonica Group]
          Length = 2241

 Score =  102 bits (255), Expect = 2e-20
 Identities = 51/113 (45%), Positives = 69/113 (61%)
 Frame = +2

Query: 2    THAQLEAANNRYKSAADRGRRHLEFNVGDFVWAVLTKDRYPAHEYNKLVARKIGPVEILE 181
            T   +E  N +YK A D+GRR L F  GD VW  L K+R+P    +KL+ R  GP ++L 
Sbjct: 1402 TKENIERMNAKYKFAGDKGRRELNFEPGDLVWLHLRKERFPDLRKSKLMPRADGPFKVLA 1461

Query: 182  KINPNAYRLKLPSHLRTSDVFNVKHLVPFMGDNDDLDNPPDSRPNLLPEGEDD 340
            KIN NAY++ LP+  R S  FNV  L P++G+ D+L    +SR   + EGEDD
Sbjct: 1462 KINENAYKIDLPADFRVSSTFNVADLKPYLGEEDEL----ESRTTQMQEGEDD 1510


>gb|AAX95495.1| Retrotransposon gag protein, putative [Oryza sativa Japonica Group]
          Length = 1739

 Score =  102 bits (254), Expect = 3e-20
 Identities = 51/113 (45%), Positives = 69/113 (61%)
 Frame = +2

Query: 2    THAQLEAANNRYKSAADRGRRHLEFNVGDFVWAVLTKDRYPAHEYNKLVARKIGPVEILE 181
            T   +E  N +YK A D+GRR L F  GD VW  L K+R+P    +KL+ R  GP ++L 
Sbjct: 1563 TKENIERMNAKYKFAGDKGRRELNFEPGDMVWLHLRKERFPDLRKSKLMPRADGPFKVLA 1622

Query: 182  KINPNAYRLKLPSHLRTSDVFNVKHLVPFMGDNDDLDNPPDSRPNLLPEGEDD 340
            KIN NAY++ LP+  R S  FNV  L P++G+ D+L    +SR   + EGEDD
Sbjct: 1623 KINENAYKIDLPADFRVSPTFNVADLKPYLGEEDEL----ESRTTQMQEGEDD 1671


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