BLASTX nr result

ID: Scutellaria22_contig00028971 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00028971
         (315 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004144262.1| PREDICTED: putative pentatricopeptide repeat...   146   1e-33
ref|NP_173972.1| pentatricopeptide repeat-containing protein [Ar...   142   2e-32
ref|XP_002322859.1| predicted protein [Populus trichocarpa] gi|2...   142   3e-32
ref|XP_003517831.1| PREDICTED: putative pentatricopeptide repeat...   141   5e-32
ref|XP_002893401.1| pentatricopeptide repeat-containing protein ...   141   5e-32

>ref|XP_004144262.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g26500-like [Cucumis sativus]
          Length = 505

 Score =  146 bits (369), Expect = 1e-33
 Identities = 72/104 (69%), Positives = 85/104 (81%)
 Frame = -3

Query: 313 RTLATARELKKCVEFFHLMNSFGYEYKVDTFNKVVEMLCRSKLVAEAKHVVEKLREFIEP 134
           RTLATARELKKCVEFFHLMN +G+ Y + T N+VVE LC  KLV EAK +V KL E+I+ 
Sbjct: 154 RTLATARELKKCVEFFHLMNGYGFCYSLVTLNRVVEKLCGCKLVDEAKFLVMKLNEWIKA 213

Query: 133 DGETYRWLIHGFCDVGDLIEASKVWNLMVDEGFDPDSCAVEVML 2
           DG TY+ LI GFC+VGDLIEASK+WNLMVDEGF+P+  AVE M+
Sbjct: 214 DGVTYKLLIKGFCNVGDLIEASKMWNLMVDEGFEPEMEAVEEMM 257


>ref|NP_173972.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75263259|sp|Q9FZD4.1|PPR59_ARATH RecName:
           Full=Putative pentatricopeptide repeat-containing
           protein At1g26500 gi|9797751|gb|AAF98569.1|AC013427_12
           Contains similarity to a hypothetical protein T12C14_170
           gi|7340718 from Arabidopsis thaliana BAC T12C14
           gb|AL162507 and contains multiple PPR PF|01535 repeats
           [Arabidopsis thaliana] gi|332192576|gb|AEE30697.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 505

 Score =  142 bits (359), Expect = 2e-32
 Identities = 67/96 (69%), Positives = 79/96 (82%)
 Frame = -3

Query: 313 RTLATARELKKCVEFFHLMNSFGYEYKVDTFNKVVEMLCRSKLVAEAKHVVEKLREFIEP 134
           +TLA+ARELKKCV +FHLMN FGY Y V+T N+ VE LC+ KLV EAK V  KL+EFI+P
Sbjct: 154 KTLASARELKKCVNYFHLMNGFGYLYNVETMNRGVETLCKEKLVEEAKFVFIKLKEFIKP 213

Query: 133 DGETYRWLIHGFCDVGDLIEASKVWNLMVDEGFDPD 26
           D  TYR +I GFCDVGDLIEA+K+WNLM+DEGFD D
Sbjct: 214 DEITYRTMIQGFCDVGDLIEAAKLWNLMMDEGFDVD 249


>ref|XP_002322859.1| predicted protein [Populus trichocarpa] gi|222867489|gb|EEF04620.1|
           predicted protein [Populus trichocarpa]
          Length = 502

 Score =  142 bits (358), Expect = 3e-32
 Identities = 66/104 (63%), Positives = 80/104 (76%)
 Frame = -3

Query: 313 RTLATARELKKCVEFFHLMNSFGYEYKVDTFNKVVEMLCRSKLVAEAKHVVEKLREFIEP 134
           + LA+ARELKKC EFFH MN  G EY+V+  NKVVE LC+ KLV EAK VV KL+++I P
Sbjct: 149 KALASARELKKCAEFFHFMNEHGCEYRVERLNKVVENLCKGKLVEEAKFVVLKLKDWIRP 208

Query: 133 DGETYRWLIHGFCDVGDLIEASKVWNLMVDEGFDPDSCAVEVML 2
           DG TY WL+ GFCDVG+LIEASK+WNLMVDE  +P+    E M+
Sbjct: 209 DGVTYGWLVKGFCDVGELIEASKIWNLMVDESIEPEIEVFEKMM 252


>ref|XP_003517831.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g26500-like [Glycine max]
          Length = 494

 Score =  141 bits (356), Expect = 5e-32
 Identities = 71/104 (68%), Positives = 81/104 (77%)
 Frame = -3

Query: 313 RTLATARELKKCVEFFHLMNSFGYEYKVDTFNKVVEMLCRSKLVAEAKHVVEKLREFIEP 134
           RTL  ARELKKCVEFFHLMNS G EY + T NKVVE +C+S+LV EAK VV KLRE + P
Sbjct: 143 RTLGGARELKKCVEFFHLMNSNGCEYNLGTLNKVVEAMCKSRLVDEAKFVVFKLRECVRP 202

Query: 133 DGETYRWLIHGFCDVGDLIEASKVWNLMVDEGFDPDSCAVEVML 2
           DG TY+ LI G+CD GDL+ ASKVWNLM DEGF+ D  AVE M+
Sbjct: 203 DGVTYKNLIIGYCDKGDLVGASKVWNLMEDEGFEADVDAVEKMM 246


>ref|XP_002893401.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297339243|gb|EFH69660.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 500

 Score =  141 bits (356), Expect = 5e-32
 Identities = 67/96 (69%), Positives = 79/96 (82%)
 Frame = -3

Query: 313 RTLATARELKKCVEFFHLMNSFGYEYKVDTFNKVVEMLCRSKLVAEAKHVVEKLREFIEP 134
           +TLA+ARELKKCV FFHLMN FGY Y V T N+ VE LC+ KLV EAK VV KLREFI+P
Sbjct: 154 KTLASARELKKCVNFFHLMNDFGYLYNVQTMNRGVETLCKEKLVEEAKFVVIKLREFIKP 213

Query: 133 DGETYRWLIHGFCDVGDLIEASKVWNLMVDEGFDPD 26
           D  TYR +I GFCDVGDLI+A+K+WNLM+D+GF+ D
Sbjct: 214 DEITYRTMIKGFCDVGDLIKAAKLWNLMMDDGFEVD 249


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