BLASTX nr result

ID: Scutellaria22_contig00028930 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00028930
         (272 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283907.2| PREDICTED: pentatricopeptide repeat-containi...   130   1e-28
emb|CAN80524.1| hypothetical protein VITISV_030537 [Vitis vinifera]   130   1e-28
ref|XP_002301082.1| predicted protein [Populus trichocarpa] gi|2...   127   7e-28
ref|XP_002532248.1| pentatricopeptide repeat-containing protein,...   124   1e-26
ref|XP_003527867.1| PREDICTED: pentatricopeptide repeat-containi...   118   4e-25

>ref|XP_002283907.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g18475-like [Vitis vinifera]
          Length = 513

 Score =  130 bits (326), Expect = 1e-28
 Identities = 61/90 (67%), Positives = 73/90 (81%)
 Frame = +1

Query: 1   GVYLNKASYRIVLNSLCKEGELEKSVDLLTLMLYRGFMPHVGTSNELLVSLCKAGKASDA 180
           GVYLNKASYRIVLNSLC+EGEL+K+  L+ LML RG +PH  TSNELLV LC+AGK  DA
Sbjct: 407 GVYLNKASYRIVLNSLCREGELQKATQLVGLMLGRGVLPHFATSNELLVHLCEAGKVGDA 466

Query: 181 AKLLFGLVEMGFKPEPATWNVLIDSICRER 270
              L GL+E+GFKPEP +W +L++ ICRER
Sbjct: 467 VMALLGLLELGFKPEPNSWALLVELICRER 496


>emb|CAN80524.1| hypothetical protein VITISV_030537 [Vitis vinifera]
          Length = 714

 Score =  130 bits (326), Expect = 1e-28
 Identities = 61/90 (67%), Positives = 73/90 (81%)
 Frame = +1

Query: 1   GVYLNKASYRIVLNSLCKEGELEKSVDLLTLMLYRGFMPHVGTSNELLVSLCKAGKASDA 180
           GVYLNKASYRIVLNSLC+EGEL+K+  L+ LML RG +PH  TSNELLV LC+AGK  DA
Sbjct: 450 GVYLNKASYRIVLNSLCREGELQKATQLVGLMLGRGVLPHFATSNELLVHLCEAGKVGDA 509

Query: 181 AKLLFGLVEMGFKPEPATWNVLIDSICRER 270
              L GL+E+GFKPEP +W +L++ ICRER
Sbjct: 510 VMALLGLLELGFKPEPNSWALLVELICRER 539


>ref|XP_002301082.1| predicted protein [Populus trichocarpa] gi|222842808|gb|EEE80355.1|
           predicted protein [Populus trichocarpa]
          Length = 509

 Score =  127 bits (320), Expect = 7e-28
 Identities = 59/90 (65%), Positives = 74/90 (82%)
 Frame = +1

Query: 1   GVYLNKASYRIVLNSLCKEGELEKSVDLLTLMLYRGFMPHVGTSNELLVSLCKAGKASDA 180
           G+YLNKASYRIVLNSLC++G+L+K+++LL L L RGF+PH  TSNELLV LCKAG A DA
Sbjct: 397 GIYLNKASYRIVLNSLCQKGDLDKALELLGLTLSRGFVPHHATSNELLVGLCKAGMADDA 456

Query: 181 AKLLFGLVEMGFKPEPATWNVLIDSICRER 270
              L+GL EMGFKPE  +W +L++ +CRER
Sbjct: 457 VVALYGLAEMGFKPEQDSWALLVEFVCRER 486


>ref|XP_002532248.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223528066|gb|EEF30142.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 521

 Score =  124 bits (310), Expect = 1e-26
 Identities = 61/90 (67%), Positives = 69/90 (76%)
 Frame = +1

Query: 1   GVYLNKASYRIVLNSLCKEGELEKSVDLLTLMLYRGFMPHVGTSNELLVSLCKAGKASDA 180
           GVYLNK SYRIVLN LC++GELEKS  LL LML RGF+PH  TSNELLV LC+AG   +A
Sbjct: 406 GVYLNKGSYRIVLNFLCQKGELEKSCALLGLMLSRGFVPHYATSNELLVCLCEAGMVDNA 465

Query: 181 AKLLFGLVEMGFKPEPATWNVLIDSICRER 270
              LFGL +MGF PEP +W  LI+ ICRER
Sbjct: 466 VTALFGLTQMGFTPEPKSWAHLIEYICRER 495



 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 28/85 (32%), Positives = 45/85 (52%)
 Frame = +1

Query: 13  NKASYRIVLNSLCKEGELEKSVDLLTLMLYRGFMPHVGTSNELLVSLCKAGKASDAAKLL 192
           N  +Y +++N  CKEG LE++ ++   M   G  P       L+   C  G+  +A +LL
Sbjct: 305 NVFNYSVLMNGFCKEGRLEEAKEVFDEMKSSGLKPDTVGYTTLINCFCGVGRIDEAMELL 364

Query: 193 FGLVEMGFKPEPATWNVLIDSICRE 267
             + EM  K +  T+NVL+  +CRE
Sbjct: 365 KEMTEMKCKADAVTFNVLLKGLCRE 389


>ref|XP_003527867.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g18475-like [Glycine max]
          Length = 546

 Score =  118 bits (296), Expect = 4e-25
 Identities = 61/90 (67%), Positives = 68/90 (75%)
 Frame = +1

Query: 1   GVYLNKASYRIVLNSLCKEGELEKSVDLLTLMLYRGFMPHVGTSNELLVSLCKAGKASDA 180
           GVYLNK SYRIVLNSL ++ EL+++ +LL LML RGF PH  TSNELLV LCKAG   DA
Sbjct: 440 GVYLNKGSYRIVLNSLTQKCELKRAKELLGLMLRRGFQPHYATSNELLVCLCKAGMVDDA 499

Query: 181 AKLLFGLVEMGFKPEPATWNVLIDSICRER 270
           A  LF LVEMGF+P   TW VLI  ICRER
Sbjct: 500 AVALFDLVEMGFQPGLETWEVLIGLICRER 529



 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 31/89 (34%), Positives = 50/89 (56%)
 Frame = +1

Query: 1   GVYLNKASYRIVLNSLCKEGELEKSVDLLTLMLYRGFMPHVGTSNELLVSLCKAGKASDA 180
           G Y N  +Y  +++ LCK G+LE +  +L  +   G  P   T   L+  LC+ GK+ +A
Sbjct: 335 GCYPNVYNYSALVDGLCKVGKLEDAKGVLAEIKGSGLKPDAVTYTSLINFLCRNGKSDEA 394

Query: 181 AKLLFGLVEMGFKPEPATWNVLIDSICRE 267
            +LL  + E G + +  T+NVL+  +CRE
Sbjct: 395 IELLEEMKENGCQADSVTFNVLLGGLCRE 423



 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 25/81 (30%), Positives = 46/81 (56%)
 Frame = +1

Query: 22  SYRIVLNSLCKEGELEKSVDLLTLMLYRGFMPHVGTSNELLVSLCKAGKASDAAKLLFGL 201
           +Y +++N  C+ G+ +++ +++  M   G  P+V   + L+  LCK GK  DA  +L  +
Sbjct: 307 TYNVLINGFCRGGKPDRARNVIQFMKSNGCYPNVYNYSALVDGLCKVGKLEDAKGVLAEI 366

Query: 202 VEMGFKPEPATWNVLIDSICR 264
              G KP+  T+  LI+ +CR
Sbjct: 367 KGSGLKPDAVTYTSLINFLCR 387


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