BLASTX nr result

ID: Scutellaria22_contig00028459 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00028459
         (388 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001118876.1| SKP1-like protein 21 [Arabidopsis thaliana] ...   132   4e-29
ref|NP_567113.1| SKP1-like protein 21 [Arabidopsis thaliana] gi|...   132   4e-29
ref|XP_003520975.1| PREDICTED: SKP1-like protein 21-like [Glycin...   130   8e-29
ref|NP_566058.2| SKP1-like protein 20 [Arabidopsis thaliana] gi|...   129   3e-28
ref|XP_002878380.1| hypothetical protein ARALYDRAFT_486615 [Arab...   129   3e-28

>ref|NP_001118876.1| SKP1-like protein 21 [Arabidopsis thaliana]
           gi|332646678|gb|AEE80199.1| SKP1-like protein 21
           [Arabidopsis thaliana]
          Length = 349

 Score =  132 bits (331), Expect = 4e-29
 Identities = 63/87 (72%), Positives = 72/87 (82%), Gaps = 1/87 (1%)
 Frame = -3

Query: 260 MIEADSEIIKPEILKAYVWLQTSDDSIQQVEQEVAMFCPFICRE-IHSGMGSSKKYPISL 84
           M E +  IIKPE++K+Y+WL+T+D SIQQVEQEVAMFCP IC+E I  G+GSSK Y ISL
Sbjct: 1   MSEGEMAIIKPEMMKSYIWLETADGSIQQVEQEVAMFCPMICQEVIQKGVGSSKNYAISL 60

Query: 83  PSRVNSPMLSLILDYCRFHQVPGRSNK 3
           P RVN  MLSLI DYCRFHQVPGRSNK
Sbjct: 61  PQRVNPAMLSLIFDYCRFHQVPGRSNK 87


>ref|NP_567113.1| SKP1-like protein 21 [Arabidopsis thaliana]
           gi|75155821|sp|Q8LF97.1|ASK21_ARATH RecName:
           Full=SKP1-like protein 21; Short=AtSK21
           gi|21537190|gb|AAM61531.1| putative SKP1-like protein
           [Arabidopsis thaliana] gi|332646677|gb|AEE80198.1|
           SKP1-like protein 21 [Arabidopsis thaliana]
          Length = 351

 Score =  132 bits (331), Expect = 4e-29
 Identities = 63/87 (72%), Positives = 72/87 (82%), Gaps = 1/87 (1%)
 Frame = -3

Query: 260 MIEADSEIIKPEILKAYVWLQTSDDSIQQVEQEVAMFCPFICRE-IHSGMGSSKKYPISL 84
           M E +  IIKPE++K+Y+WL+T+D SIQQVEQEVAMFCP IC+E I  G+GSSK Y ISL
Sbjct: 1   MSEGEMAIIKPEMMKSYIWLETADGSIQQVEQEVAMFCPMICQEVIQKGVGSSKNYAISL 60

Query: 83  PSRVNSPMLSLILDYCRFHQVPGRSNK 3
           P RVN  MLSLI DYCRFHQVPGRSNK
Sbjct: 61  PQRVNPAMLSLIFDYCRFHQVPGRSNK 87


>ref|XP_003520975.1| PREDICTED: SKP1-like protein 21-like [Glycine max]
          Length = 347

 Score =  130 bits (328), Expect = 8e-29
 Identities = 64/87 (73%), Positives = 71/87 (81%), Gaps = 1/87 (1%)
 Frame = -3

Query: 260 MIEADSEIIKPEILKAYVWLQTSDDSIQQVEQEVAMFCPFICRE-IHSGMGSSKKYPISL 84
           M E D  +IKPE++K YVWLQTSDDSIQQVEQE+AMFCP IC+E I  GMGSSK   I L
Sbjct: 1   MSEIDLAVIKPEMMKLYVWLQTSDDSIQQVEQEIAMFCPLICQEIIQKGMGSSKSCAICL 60

Query: 83  PSRVNSPMLSLILDYCRFHQVPGRSNK 3
           P +V+  MLSLILDYCRFHQVPGRSNK
Sbjct: 61  PQQVSPAMLSLILDYCRFHQVPGRSNK 87


>ref|NP_566058.2| SKP1-like protein 20 [Arabidopsis thaliana]
           gi|330255526|gb|AEC10620.1| SKP1-like protein 20
           [Arabidopsis thaliana]
          Length = 342

 Score =  129 bits (323), Expect = 3e-28
 Identities = 61/87 (70%), Positives = 71/87 (81%), Gaps = 1/87 (1%)
 Frame = -3

Query: 260 MIEADSEIIKPEILKAYVWLQTSDDSIQQVEQEVAMFCPFICRE-IHSGMGSSKKYPISL 84
           M E D  ++KPE +K+Y+WLQT+D SIQQVEQEVAMFCP IC+E I  G+GSSK + ISL
Sbjct: 1   MSEGDLAVMKPETMKSYIWLQTADGSIQQVEQEVAMFCPMICQEVIQKGVGSSKNHAISL 60

Query: 83  PSRVNSPMLSLILDYCRFHQVPGRSNK 3
           P RVN  M SLILDYCRFHQ+PGRSNK
Sbjct: 61  PQRVNPAMFSLILDYCRFHQLPGRSNK 87


>ref|XP_002878380.1| hypothetical protein ARALYDRAFT_486615 [Arabidopsis lyrata subsp.
           lyrata] gi|297324218|gb|EFH54639.1| hypothetical protein
           ARALYDRAFT_486615 [Arabidopsis lyrata subsp. lyrata]
          Length = 346

 Score =  129 bits (323), Expect = 3e-28
 Identities = 61/80 (76%), Positives = 69/80 (86%), Gaps = 1/80 (1%)
 Frame = -3

Query: 239 IIKPEILKAYVWLQTSDDSIQQVEQEVAMFCPFICRE-IHSGMGSSKKYPISLPSRVNSP 63
           IIKPE++K+Y+WL+T+D SIQQVEQEVAMFCP IC+E I  G+GSSK Y ISLP RVN  
Sbjct: 3   IIKPEMMKSYIWLETADGSIQQVEQEVAMFCPMICQEVIQKGVGSSKNYAISLPQRVNPA 62

Query: 62  MLSLILDYCRFHQVPGRSNK 3
           MLSLI DYCRFHQVPGRSNK
Sbjct: 63  MLSLIFDYCRFHQVPGRSNK 82


Top