BLASTX nr result

ID: Scutellaria22_contig00028305 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00028305
         (308 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002299342.1| predicted protein [Populus trichocarpa] gi|2...   106   2e-21
ref|XP_002267026.2| PREDICTED: pentatricopeptide repeat-containi...   101   5e-20
emb|CBI35666.3| unnamed protein product [Vitis vinifera]              101   5e-20
emb|CAN69881.1| hypothetical protein VITISV_024112 [Vitis vinifera]   101   5e-20
ref|XP_002873605.1| pentatricopeptide repeat-containing protein ...    97   1e-18

>ref|XP_002299342.1| predicted protein [Populus trichocarpa] gi|222846600|gb|EEE84147.1|
           predicted protein [Populus trichocarpa]
          Length = 684

 Score =  106 bits (264), Expect = 2e-21
 Identities = 53/102 (51%), Positives = 69/102 (67%), Gaps = 3/102 (2%)
 Frame = +2

Query: 2   APQSYKHLLEACSQLRSLRFGKLIH---QRLSENSPLFLVNHVLQMYCDCGSLSDARKLF 172
           +P+SYK L EAC +++SL  G+L H   QR  +N P FL N VL+MYC CGSL+DARK+F
Sbjct: 9   SPRSYKCLFEACGKIKSLFDGRLFHEQMQRTVKNPPEFLENSVLKMYCKCGSLADARKVF 68

Query: 173 DEMTERTMASWVIIISAYADEGLMKNAFELYLRIQESNIKPN 298
           DEM ER + SW  IISAYA+ G+    F ++  + E   KPN
Sbjct: 69  DEMRERNLVSWNTIISAYAENGVFDKGFCMFSNMLELETKPN 110


>ref|XP_002267026.2| PREDICTED: pentatricopeptide repeat-containing protein At5g13270,
           chloroplastic-like [Vitis vinifera]
          Length = 835

 Score =  101 bits (252), Expect = 5e-20
 Identities = 51/104 (49%), Positives = 69/104 (66%), Gaps = 3/104 (2%)
 Frame = +2

Query: 5   PQSYKHLLEACSQLRSLRFGKLIHQRLS---ENSPLFLVNHVLQMYCDCGSLSDARKLFD 175
           P SY+ L EAC +LRSL  G+LIH RL    +N    + N +L+MYCDCGS  D +K+FD
Sbjct: 87  PHSYQCLFEACGKLRSLADGRLIHDRLRRTVKNPSGSIENCLLRMYCDCGSCIDVQKVFD 146

Query: 176 EMTERTMASWVIIISAYADEGLMKNAFELYLRIQESNIKPNPAI 307
           EM  + + SWVI+ISAYA  G ++ A  L+  +Q S I+PN A+
Sbjct: 147 EMLMKNLVSWVIVISAYAKNGELEKAIRLFSDMQASGIRPNSAV 190


>emb|CBI35666.3| unnamed protein product [Vitis vinifera]
          Length = 762

 Score =  101 bits (252), Expect = 5e-20
 Identities = 51/104 (49%), Positives = 69/104 (66%), Gaps = 3/104 (2%)
 Frame = +2

Query: 5   PQSYKHLLEACSQLRSLRFGKLIHQRLS---ENSPLFLVNHVLQMYCDCGSLSDARKLFD 175
           P SY+ L EAC +LRSL  G+LIH RL    +N    + N +L+MYCDCGS  D +K+FD
Sbjct: 87  PHSYQCLFEACGKLRSLADGRLIHDRLRRTVKNPSGSIENCLLRMYCDCGSCIDVQKVFD 146

Query: 176 EMTERTMASWVIIISAYADEGLMKNAFELYLRIQESNIKPNPAI 307
           EM  + + SWVI+ISAYA  G ++ A  L+  +Q S I+PN A+
Sbjct: 147 EMLMKNLVSWVIVISAYAKNGELEKAIRLFSDMQASGIRPNSAV 190


>emb|CAN69881.1| hypothetical protein VITISV_024112 [Vitis vinifera]
          Length = 734

 Score =  101 bits (252), Expect = 5e-20
 Identities = 51/104 (49%), Positives = 69/104 (66%), Gaps = 3/104 (2%)
 Frame = +2

Query: 5   PQSYKHLLEACSQLRSLRFGKLIHQRLS---ENSPLFLVNHVLQMYCDCGSLSDARKLFD 175
           P SY+ L EAC +LRSL  G+LIH RL    +N    + N +L+MYCDCGS  D +K+FD
Sbjct: 87  PHSYQCLFEACGKLRSLADGRLIHDRLRRTVKNPSGSIENCLLRMYCDCGSXIDVQKVFD 146

Query: 176 EMTERTMASWVIIISAYADEGLMKNAFELYLRIQESNIKPNPAI 307
           EM  + + SWVI+ISAYA  G ++ A  L+  +Q S I+PN A+
Sbjct: 147 EMLMKNLVSWVIVISAYAKNGELEKAIRLFSDMQASGIRPNSAV 190


>ref|XP_002873605.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297319442|gb|EFH49864.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 750

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 51/98 (52%), Positives = 66/98 (67%), Gaps = 3/98 (3%)
 Frame = +2

Query: 11  SYKHLLEACSQLRSLRFGKLIHQRLS---ENSPLFLVNHVLQMYCDCGSLSDARKLFDEM 181
           SY+ L EAC +LRSL  G+L+H R+    EN  + L N VLQMYC+CGSL DA KLFDEM
Sbjct: 83  SYQCLFEACRELRSLSHGRLLHNRMRMGIENPSVLLQNCVLQMYCECGSLEDADKLFDEM 142

Query: 182 TERTMASWVIIISAYADEGLMKNAFELYLRIQESNIKP 295
           ++    S   +ISAYA++GL+  A  L+ R+ ES  KP
Sbjct: 143 SDLNAVSRTTMISAYAEQGLLDKAVGLFSRMLESGDKP 180


Top