BLASTX nr result

ID: Scutellaria22_contig00027982 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00027982
         (656 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004154212.1| PREDICTED: 30S ribosomal protein S12-B, chlo...   215   7e-54
ref|XP_004174176.1| PREDICTED: 30S ribosomal protein S12-B, chlo...   181   4e-44
ref|YP_006503815.1| ribosomal protein S12 (chloroplast) [Datura ...   178   7e-43
ref|XP_003599578.1| NAD(P)H-quinone oxidoreductase subunit 2 A [...   177   2e-42
gb|AEQ37137.1| ribosomal protein S12 (chloroplast) [Ginkgo bilob...   175   6e-42

>ref|XP_004154212.1| PREDICTED: 30S ribosomal protein S12-B, chloroplastic-like [Cucumis
           sativus]
          Length = 127

 Score =  215 bits (547), Expect = 7e-54
 Identities = 109/121 (90%), Positives = 113/121 (93%)
 Frame = -1

Query: 365 VEEGRGFSSAEKDPMNSKELNEEPYEVKISCTVL*SGSKGDLSVNFSTITPKKPNSALRK 186
           +EEGR FS+ EKDPM SKELNEEPYEV+IS TVL SG KGDLSVNFSTITPKKPNSALRK
Sbjct: 1   MEEGRRFSNEEKDPMTSKELNEEPYEVQISRTVLSSGCKGDLSVNFSTITPKKPNSALRK 60

Query: 185 VARVRLTSGFEITAYIPGIGHNLQEHSSVLVRGGRVKDLPGVRYHIVRGTLDAVGVKDRQ 6
           VARVRLTSGFEITAYIPGIGHNLQEHS VLVRGGRVKDLPG+RYHIVRG LDAVGVKDRQ
Sbjct: 61  VARVRLTSGFEITAYIPGIGHNLQEHSVVLVRGGRVKDLPGLRYHIVRGNLDAVGVKDRQ 120

Query: 5   Q 3
           Q
Sbjct: 121 Q 121


>ref|XP_004174176.1| PREDICTED: 30S ribosomal protein S12-B, chloroplastic-like [Cucumis
           sativus]
          Length = 117

 Score =  181 bits (459), Expect(2) = 4e-44
 Identities = 95/115 (82%), Positives = 101/115 (87%)
 Frame = -1

Query: 410 HENVTKLVLVTLRDRVEEGRGFSSAEKDPMNSKELNEEPYEVKISCTVL*SGSKGDLSVN 231
           +ENVT+LV VTLRD +EEGR FS+ EKDPM SKELNEEPYEVKIS TVL SGSKGDLSVN
Sbjct: 2   NENVTELVPVTLRDGMEEGRRFSNEEKDPMTSKELNEEPYEVKISRTVLSSGSKGDLSVN 61

Query: 230 FSTITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNLQEHSSVLVRGGRVKDLP 66
           FSTITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNLQEHS V V G  ++  P
Sbjct: 62  FSTITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNLQEHSVVFVGGEGLRIYP 116



 Score = 23.1 bits (48), Expect(2) = 4e-44
 Identities = 9/9 (100%), Positives = 9/9 (100%)
 Frame = -2

Query: 88  GEGLRIYPV 62
           GEGLRIYPV
Sbjct: 109 GEGLRIYPV 117


>ref|YP_006503815.1| ribosomal protein S12 (chloroplast) [Datura stramonium]
           gi|350996572|gb|AEQ37083.1| ribosomal protein S12
           [Datura stramonium]
          Length = 137

 Score =  178 bits (452), Expect = 7e-43
 Identities = 91/95 (95%), Positives = 91/95 (95%)
 Frame = -1

Query: 287 VKISCTVL*SGSKGDLSVNFSTITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNLQEH 108
           V ISCTVL SGSKGDLSVNFSTITPKKPNSALRKVARVRLTSGFEITAYIPGIGHN QEH
Sbjct: 37  VYISCTVLKSGSKGDLSVNFSTITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNSQEH 96

Query: 107 SSVLVRGGRVKDLPGVRYHIVRGTLDAVGVKDRQQ 3
           S VLVRGGRVKDLPGVRYHIVRGTLDAVGVKDRQQ
Sbjct: 97  SVVLVRGGRVKDLPGVRYHIVRGTLDAVGVKDRQQ 131


>ref|XP_003599578.1| NAD(P)H-quinone oxidoreductase subunit 2 A [Medicago truncatula]
           gi|355488626|gb|AES69829.1| NAD(P)H-quinone
           oxidoreductase subunit 2 A [Medicago truncatula]
          Length = 871

 Score =  177 bits (448), Expect = 2e-42
 Identities = 93/115 (80%), Positives = 96/115 (83%)
 Frame = -1

Query: 347 FSSAEKDPMNSKELNEEPYEVKISCTVL*SGSKGDLSVNFSTITPKKPNSALRKVARVRL 168
           FS+ EKDP+ SKELNE+               K DLSVNFSTITPKKPNSALRKVARVRL
Sbjct: 62  FSNEEKDPITSKELNED---------------KDDLSVNFSTITPKKPNSALRKVARVRL 106

Query: 167 TSGFEITAYIPGIGHNLQEHSSVLVRGGRVKDLPGVRYHIVRGTLDAVGVKDRQQ 3
           TSGFEITAYIPGIGHNLQEHS VLVRGGRVKDLPGVRYHIVRGTLDAVGVKDRQQ
Sbjct: 107 TSGFEITAYIPGIGHNLQEHSVVLVRGGRVKDLPGVRYHIVRGTLDAVGVKDRQQ 161


>gb|AEQ37137.1| ribosomal protein S12 (chloroplast) [Ginkgo biloba]
           gi|350996664|gb|AEQ37174.1| ribosomal protein S12
           (chloroplast) [Ginkgo biloba]
          Length = 141

 Score =  175 bits (444), Expect = 6e-42
 Identities = 89/95 (93%), Positives = 90/95 (94%)
 Frame = -1

Query: 287 VKISCTVL*SGSKGDLSVNFSTITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNLQEH 108
           V ISCTVL SG KG+LSVNFST TPKKPNSALRKVARVRLTSGFEITAYIPGIGHNLQEH
Sbjct: 37  VYISCTVLLSGGKGNLSVNFSTTTPKKPNSALRKVARVRLTSGFEITAYIPGIGHNLQEH 96

Query: 107 SSVLVRGGRVKDLPGVRYHIVRGTLDAVGVKDRQQ 3
           S VLVRGGRVKDLPGVRYHIVRGTLDAVGVKDRQQ
Sbjct: 97  SVVLVRGGRVKDLPGVRYHIVRGTLDAVGVKDRQQ 131


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