BLASTX nr result
ID: Scutellaria22_contig00027888
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Scutellaria22_contig00027888
(675 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002308726.1| glutamate-gated kainate-type ion channel rec... 71 2e-16
ref|XP_002324371.1| glutamate-gated kainate-type ion channel rec... 62 5e-15
ref|XP_002336789.1| glutamate-gated kainate-type ion channel rec... 67 5e-15
ref|XP_002515372.1| glutamate receptor 2 plant, putative [Ricinu... 58 6e-15
ref|XP_002324368.1| glutamate-gated kainate-type ion channel rec... 59 1e-14
>ref|XP_002308726.1| glutamate-gated kainate-type ion channel receptor subunit GluR5
[Populus trichocarpa] gi|222854702|gb|EEE92249.1|
glutamate-gated kainate-type ion channel receptor
subunit GluR5 [Populus trichocarpa]
Length = 324
Score = 71.2 bits (173), Expect(2) = 2e-16
Identities = 43/128 (33%), Positives = 78/128 (60%), Gaps = 5/128 (3%)
Frame = -2
Query: 431 FPKGFAAVSDISRGIIRLTESGAIQKMEQVIY--NAECPDDSSSL--NRVSLRSFLVLFA 264
FPKG V DISR I+ +TE ++++E + N+ CP+ SS+ N +SL+SF LF
Sbjct: 153 FPKGSPLVPDISRAILNVTEGDEMKQIEGAWFGKNSTCPESGSSISSNSLSLKSFWGLFL 212
Query: 263 ISGFATVICLVVSLLVPLHNNRSLLKRMSDLMAYIFSKILALQKYF-KRNEPSSLLKTTS 87
I+G A ++ L++ +++ ++ R++L R SD A I+S+I + F +R+ SS + +
Sbjct: 213 IAGLAALLALIIFIVMFVYRERNVL-RSSDSTASIWSRIRNFFRIFIQRDSTSSTFRQSD 271
Query: 86 SRDQKQVA 63
+D+ ++
Sbjct: 272 PKDRNSIS 279
Score = 40.4 bits (93), Expect(2) = 2e-16
Identities = 21/56 (37%), Positives = 29/56 (51%)
Frame = -3
Query: 670 IYNSIHESQKALSLGSKNGGISAYCDILPRINHILSQSCGQYKIVGAVHPADGYAF 503
+Y+S E S GS NGGI+A D L I ILS+ C +Y ++ G+ F
Sbjct: 96 VYSSPEECHHLFSKGSGNGGIAAAFDELAYIKIILSRYCSKYTVIDPKFKTGGFGF 151
>ref|XP_002324371.1| glutamate-gated kainate-type ion channel receptor subunit GluR5
[Populus trichocarpa] gi|222865805|gb|EEF02936.1|
glutamate-gated kainate-type ion channel receptor subunit
GluR5 [Populus trichocarpa]
Length = 883
Score = 61.6 bits (148), Expect(2) = 5e-15
Identities = 34/100 (34%), Positives = 62/100 (62%), Gaps = 4/100 (4%)
Frame = -2
Query: 434 AFPKGFAAVSDISRGIIRLTESGAIQKMEQVIY--NAECPDDSSSL--NRVSLRSFLVLF 267
AFPKG V D+SR ++ +TE + K+E + + CPD S+S+ N +SL+SF LF
Sbjct: 747 AFPKGSPLVPDVSRAVLNITEGDKMTKIESAWFGKQSNCPDSSTSVTSNSLSLKSFWGLF 806
Query: 266 AISGFATVICLVVSLLVPLHNNRSLLKRMSDLMAYIFSKI 147
I+G A+++ L++ + + ++ R L+ ++ ++ I SK+
Sbjct: 807 LIAGVASLLALIIFMFMFVYKERKKLRPLNSTIS-IRSKV 845
Score = 45.1 bits (105), Expect(2) = 5e-15
Identities = 21/57 (36%), Positives = 31/57 (54%)
Frame = -3
Query: 670 IYNSIHESQKALSLGSKNGGISAYCDILPRINHILSQSCGQYKIVGAVHPADGYAFA 500
+YN+ + LS GS NGGI+A D +P LS+ C +Y ++ DG+ FA
Sbjct: 691 VYNTTEQWDDLLSKGSGNGGIAAAFDEVPYTRLFLSKYCSKYAVIDPTFKTDGFGFA 747
>ref|XP_002336789.1| glutamate-gated kainate-type ion channel receptor subunit GluR5
[Populus trichocarpa] gi|222836912|gb|EEE75305.1|
glutamate-gated kainate-type ion channel receptor
subunit GluR5 [Populus trichocarpa]
Length = 452
Score = 67.0 bits (162), Expect(2) = 5e-15
Identities = 42/128 (32%), Positives = 77/128 (60%), Gaps = 5/128 (3%)
Frame = -2
Query: 431 FPKGFAAVSDISRGIIRLTESGAIQKMEQVIY--NAECPDDSSSL--NRVSLRSFLVLFA 264
FPKG + DISR I+ +TE ++++E + + CP+ SSS+ N +SL+SF LF
Sbjct: 262 FPKGSPLMPDISRAILNVTEGDEMKQIEGAWFGKKSTCPESSSSISSNSLSLKSFWGLFL 321
Query: 263 ISGFATVICLVVSLLVPLHNNRSLLKRMSDLMAYIFSKILALQKYF-KRNEPSSLLKTTS 87
I+G A ++ L++ +++ ++ R++L R SD A I+S+I + F +R+ SS + +
Sbjct: 322 IAGLAALLALIIFIVMFVYRERNVL-RSSDSTASIWSRIENFFRIFIQRDSTSSTFRQSD 380
Query: 86 SRDQKQVA 63
D+ ++
Sbjct: 381 LNDRNGIS 388
Score = 39.7 bits (91), Expect(2) = 5e-15
Identities = 21/57 (36%), Positives = 29/57 (50%)
Frame = -3
Query: 673 RIYNSIHESQKALSLGSKNGGISAYCDILPRINHILSQSCGQYKIVGAVHPADGYAF 503
++Y S E + S GS NGGI+A D L I ILS+ C +Y ++ G F
Sbjct: 204 KVYGSPEECHRLFSKGSGNGGIAAAFDELAYIKLILSRYCSKYTMIDPKFKTGGLGF 260
>ref|XP_002515372.1| glutamate receptor 2 plant, putative [Ricinus communis]
gi|223545316|gb|EEF46821.1| glutamate receptor 2 plant,
putative [Ricinus communis]
Length = 971
Score = 57.8 bits (138), Expect(2) = 6e-15
Identities = 39/129 (30%), Positives = 69/129 (53%), Gaps = 14/129 (10%)
Frame = -2
Query: 431 FPKGFAAVSDISRGIIRLTESGAIQKMEQVIYNAE--CPDDSSSL--NRVSLRSFLVLFA 264
FP+G V DISR I+ +TE ++++E + + CPD S+S+ N + L+SF LF
Sbjct: 782 FPRGSPLVPDISRAILNVTEGDQMKRIENAWFGKQGNCPDPSTSVSSNSLGLQSFWGLFL 841
Query: 263 ISGFATVICLVV----------SLLVPLHNNRSLLKRMSDLMAYIFSKILALQKYFKRNE 114
I+G A+V+ L++ +L+ + S+ R+ DL + IF + FK++E
Sbjct: 842 IAGIASVLALMIFAVMFACEYRQVLISSESGTSIWSRIRDLSS-IFDQKDLKSHTFKKSE 900
Query: 113 PSSLLKTTS 87
++ +S
Sbjct: 901 ADEIIVPSS 909
Score = 48.5 bits (114), Expect(2) = 6e-15
Identities = 22/56 (39%), Positives = 35/56 (62%)
Frame = -3
Query: 670 IYNSIHESQKALSLGSKNGGISAYCDILPRINHILSQSCGQYKIVGAVHPADGYAF 503
IY+S+ + + LS GS+NGGI+A D LP + L++ C +Y +V + DG+ F
Sbjct: 725 IYDSVEQCHELLSKGSRNGGIAAAFDELPYMKVFLAKYCSKYTMVQPITKTDGFGF 780
>ref|XP_002324368.1| glutamate-gated kainate-type ion channel receptor subunit GluR5
[Populus trichocarpa] gi|222865802|gb|EEF02933.1|
glutamate-gated kainate-type ion channel receptor subunit
GluR5 [Populus trichocarpa]
Length = 885
Score = 58.5 bits (140), Expect(2) = 1e-14
Identities = 29/90 (32%), Positives = 58/90 (64%), Gaps = 4/90 (4%)
Frame = -2
Query: 434 AFPKGFAAVSDISRGIIRLTESGAIQKMEQVIY--NAECPDDSSSL--NRVSLRSFLVLF 267
AFPKG V D+SR ++ +TE ++++E + + CP S+S+ N +SL+SF LF
Sbjct: 749 AFPKGSPLVPDVSRAVLNMTEGDKMKEIENAWFGKQSNCPYSSTSVTSNSLSLKSFWGLF 808
Query: 266 AISGFATVICLVVSLLVPLHNNRSLLKRMS 177
I+G A+++ L++ +++ ++ R +L+ ++
Sbjct: 809 LIAGVASLLALIIFMVMFVYKERKMLRPLN 838
Score = 47.0 bits (110), Expect(2) = 1e-14
Identities = 22/57 (38%), Positives = 32/57 (56%)
Frame = -3
Query: 670 IYNSIHESQKALSLGSKNGGISAYCDILPRINHILSQSCGQYKIVGAVHPADGYAFA 500
+YNS + LS GS NGGI+A D +P + LS+ C +Y ++ DG+ FA
Sbjct: 693 VYNSTEQCDDLLSKGSGNGGIAAAFDEVPYMRLFLSKYCSKYAMIDPTFKTDGFGFA 749