BLASTX nr result

ID: Scutellaria22_contig00027766 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00027766
         (509 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAL15046.1| glutamate receptor 1.1 [Solanum lycopersicum]         159   2e-37
ref|XP_002327147.1| glutamate-gated kainate-type ion channel rec...   155   3e-36
ref|XP_003548535.1| PREDICTED: glutamate receptor 2.5-like [Glyc...   139   3e-31
ref|XP_002327144.1| glutamate-gated kainate-type ion channel rec...   138   5e-31
ref|XP_003548536.1| PREDICTED: glutamate receptor 2.5-like [Glyc...   133   2e-29

>dbj|BAL15046.1| glutamate receptor 1.1 [Solanum lycopersicum]
          Length = 913

 Score =  159 bits (403), Expect = 2e-37
 Identities = 76/133 (57%), Positives = 96/133 (72%)
 Frame = +1

Query: 13   EHIKNSASKVVLTAWICXXXXXXXXXXXXXXXMMTVPRLQPSVEEIDYLQNTNAVVGCNG 192
            E I+++ S++VLT W+C               +MTVPRL+PSV  +DYL  TNA VGCN 
Sbjct: 643  EVIRSNLSRLVLTTWLCVVVVVTACFTALLSSIMTVPRLEPSVVNVDYLLRTNAAVGCNN 702

Query: 193  NSFIVRYLINVLRFKQENVKMINSINEYPQAFKSGEIKAAFFVAPHAKVFLAEYCNDYVI 372
             SFI++YL+N L+FK EN+K I+SIN+YP AF+ GEI AAFFV PHAKVFLA++C  Y  
Sbjct: 703  KSFIIKYLVN-LQFKPENIKEISSINDYPNAFEKGEISAAFFVVPHAKVFLAKFCKGYTK 761

Query: 373  SGPSFKLGGFGFV 411
            SGP +KLGGFGFV
Sbjct: 762  SGPVYKLGGFGFV 774


>ref|XP_002327147.1| glutamate-gated kainate-type ion channel receptor subunit GluR5
           [Populus trichocarpa] gi|222835462|gb|EEE73897.1|
           glutamate-gated kainate-type ion channel receptor
           subunit GluR5 [Populus trichocarpa]
          Length = 765

 Score =  155 bits (392), Expect = 3e-36
 Identities = 75/131 (57%), Positives = 95/131 (72%)
 Frame = +1

Query: 19  IKNSASKVVLTAWICXXXXXXXXXXXXXXXMMTVPRLQPSVEEIDYLQNTNAVVGCNGNS 198
           + ++ S++VLT W+                 MTV RL+PSV +I+ LQ TNA VGCNGNS
Sbjct: 518 LTSNLSRLVLTPWLFVILIVVASFTASLSSAMTVSRLEPSVLDIETLQRTNAPVGCNGNS 577

Query: 199 FIVRYLINVLRFKQENVKMINSINEYPQAFKSGEIKAAFFVAPHAKVFLAEYCNDYVISG 378
           FIVRYLINVL FK EN+K INSI++YP+AF++G +KAAFFV PHA+VFL +YC  Y  +G
Sbjct: 578 FIVRYLINVLLFKPENIKKINSIHDYPEAFETGYVKAAFFVEPHARVFLGKYCKGYTKAG 637

Query: 379 PSFKLGGFGFV 411
           P+ KLGGFGFV
Sbjct: 638 PTLKLGGFGFV 648


>ref|XP_003548535.1| PREDICTED: glutamate receptor 2.5-like [Glycine max]
          Length = 814

 Score =  139 bits (349), Expect = 3e-31
 Identities = 69/134 (51%), Positives = 92/134 (68%), Gaps = 1/134 (0%)
 Frame = +1

Query: 13  EHIKNSASKVVLTAWICXXXXXXXXXXXXXXXMMTVPRLQPSVEEIDYLQNTNAVVGCNG 192
           E I +  ++ VL  W+                MMTV +L+PSV +I  LQ  N+ VGCNG
Sbjct: 521 EPITSPLARTVLAPWLFVILIATSTFTASLTSMMTVSQLEPSVLDIQTLQERNSPVGCNG 580

Query: 193 NSFIVRYLINVLRFKQENVKMINSINEYPQAFKSGEIKAAFFVAPHAKVFLAEY-CNDYV 369
           NSFIV+YLI++L+FK EN+K INSI +YP AF++ +I+AAFFV PHAK+FLA+Y C   +
Sbjct: 581 NSFIVKYLIDILKFKPENIKKINSIGDYPAAFQNKDIEAAFFVTPHAKIFLAKYSCKGLI 640

Query: 370 ISGPSFKLGGFGFV 411
            +G +FKLGGFGFV
Sbjct: 641 KAGSTFKLGGFGFV 654


>ref|XP_002327144.1| glutamate-gated kainate-type ion channel receptor subunit GluR5
           [Populus trichocarpa] gi|222835459|gb|EEE73894.1|
           glutamate-gated kainate-type ion channel receptor
           subunit GluR5 [Populus trichocarpa]
          Length = 779

 Score =  138 bits (347), Expect = 5e-31
 Identities = 67/134 (50%), Positives = 90/134 (67%)
 Frame = +1

Query: 10  GEHIKNSASKVVLTAWICXXXXXXXXXXXXXXXMMTVPRLQPSVEEIDYLQNTNAVVGCN 189
           G+ ++N+ S+V++  W+                 MTV RL+PSV +ID L  TNA VGCN
Sbjct: 514 GQPLRNNLSRVMVAPWLFVILIVTASFMADLSSRMTVSRLEPSVLDIDTLLKTNAPVGCN 573

Query: 190 GNSFIVRYLINVLRFKQENVKMINSINEYPQAFKSGEIKAAFFVAPHAKVFLAEYCNDYV 369
           GNSF+VRYL NVL FK EN++   S N+Y +AF++G IKAAFFV PHAKVFL +YC  + 
Sbjct: 574 GNSFVVRYLTNVLHFKPENIRKFYSGNDYLEAFETGHIKAAFFVEPHAKVFLGKYCKRFT 633

Query: 370 ISGPSFKLGGFGFV 411
            +  +F+LGGFG+V
Sbjct: 634 QAKSTFQLGGFGYV 647


>ref|XP_003548536.1| PREDICTED: glutamate receptor 2.5-like [Glycine max]
          Length = 786

 Score =  133 bits (334), Expect = 2e-29
 Identities = 65/134 (48%), Positives = 92/134 (68%), Gaps = 1/134 (0%)
 Frame = +1

Query: 13  EHIKNSASKVVLTAWICXXXXXXXXXXXXXXXMMTVPRLQPSVEEIDYLQNTNAVVGCNG 192
           E IK+  ++ VL  W+                 MT+ +L+PSV +I  LQ  N+ VGC+G
Sbjct: 575 EQIKSPLARTVLAPWLFAIYIASGTFIASLTSRMTISQLEPSVLDIQTLQERNSPVGCDG 634

Query: 193 NSFIVRYLINVLRFKQENVKMINSINEYPQAFKSGEIKAAFFVAPHAKVFLAEY-CNDYV 369
           NSFIV YL +VL FK EN++ INS+ +YP+AF++ +I+AAFFV+PHAKVFLA+Y C+  +
Sbjct: 635 NSFIVNYLTDVLEFKPENIRKINSLRDYPEAFQNKDIEAAFFVSPHAKVFLAKYSCHGLI 694

Query: 370 ISGPSFKLGGFGFV 411
            +G +F+LGGFGFV
Sbjct: 695 KAGNTFRLGGFGFV 708


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