BLASTX nr result

ID: Scutellaria22_contig00027706 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00027706
         (320 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273987.1| PREDICTED: ABC transporter B family member 1...   136   2e-30
emb|CAN76787.1| hypothetical protein VITISV_029557 [Vitis vinifera]   135   3e-30
ref|XP_002275143.2| PREDICTED: ABC transporter B family member 1...   134   6e-30
ref|XP_002301547.1| multidrug/pheromone exporter, MDR family, AB...   131   5e-29
ref|NP_171753.1| P-glycoprotein 11 [Arabidopsis thaliana] gi|753...   131   7e-29

>ref|XP_002273987.1| PREDICTED: ABC transporter B family member 11 [Vitis vinifera]
          Length = 1297

 Score =  136 bits (342), Expect = 2e-30
 Identities = 60/102 (58%), Positives = 82/102 (80%)
 Frame = -3

Query: 306  EKPPKVSILRLGNLNKPEAGFLMVGTVSAIINGAIMPVFGILLSHVIKAFYEPPHKLRKD 127
            E+PP+V I RL  LNKPE   L++GTV+AI+NG I+P+FGIL+S VIK FYEPPH+LRKD
Sbjct: 710  EQPPEVPIRRLAYLNKPEIPVLLLGTVAAIVNGTILPIFGILISSVIKTFYEPPHQLRKD 769

Query: 126  TKFWAIIFVLFGLIQLVVCPIKSYMFGVAGHKLIRRIRLMCF 1
            + FWA+IF++ G++  +  P ++Y+F VAG KLI+R+R MCF
Sbjct: 770  SNFWALIFLVLGVVSFLAFPARTYLFSVAGCKLIQRVRSMCF 811


>emb|CAN76787.1| hypothetical protein VITISV_029557 [Vitis vinifera]
          Length = 1280

 Score =  135 bits (341), Expect = 3e-30
 Identities = 60/102 (58%), Positives = 82/102 (80%)
 Frame = -3

Query: 306  EKPPKVSILRLGNLNKPEAGFLMVGTVSAIINGAIMPVFGILLSHVIKAFYEPPHKLRKD 127
            E+PP+V I RL  LNKPE   L++GTV+AI+NG I+P+FGIL+S VIK FYEPPH+LRKD
Sbjct: 698  EQPPEVPIRRLAYLNKPEIPVLLLGTVAAIVNGTILPIFGILISSVIKTFYEPPHQLRKD 757

Query: 126  TKFWAIIFVLFGLIQLVVCPIKSYMFGVAGHKLIRRIRLMCF 1
            + FWA+IF++ G++  +  P ++Y+F VAG KLI+R+R MCF
Sbjct: 758  SXFWALIFLVLGVVSFLAFPARTYLFSVAGCKLIQRVRSMCF 799


>ref|XP_002275143.2| PREDICTED: ABC transporter B family member 11-like [Vitis vinifera]
          Length = 1294

 Score =  134 bits (338), Expect = 6e-30
 Identities = 58/102 (56%), Positives = 81/102 (79%)
 Frame = -3

Query: 306  EKPPKVSILRLGNLNKPEAGFLMVGTVSAIINGAIMPVFGILLSHVIKAFYEPPHKLRKD 127
            E PPKV + RL  LNKPE  FL++GT++A++NGA+ PVFGIL+S +IK+F++PPH+LRKD
Sbjct: 707  EHPPKVPLGRLAYLNKPEIPFLLLGTIAAVVNGAVFPVFGILISSIIKSFFKPPHELRKD 766

Query: 126  TKFWAIIFVLFGLIQLVVCPIKSYMFGVAGHKLIRRIRLMCF 1
             +FWA++FV+ GL+      ++SY+F  AG KLI+RIR MCF
Sbjct: 767  ARFWALMFVVLGLVSFSSLSLRSYLFSTAGFKLIKRIRAMCF 808


>ref|XP_002301547.1| multidrug/pheromone exporter, MDR family, ABC transporter family
           [Populus trichocarpa] gi|222843273|gb|EEE80820.1|
           multidrug/pheromone exporter, MDR family, ABC
           transporter family [Populus trichocarpa]
          Length = 1224

 Score =  131 bits (330), Expect = 5e-29
 Identities = 62/106 (58%), Positives = 80/106 (75%)
 Frame = -3

Query: 318 SSEKEKPPKVSILRLGNLNKPEAGFLMVGTVSAIINGAIMPVFGILLSHVIKAFYEPPHK 139
           S +K++ P V I RL  LNKPE   L+ G ++AIING I P+FGIL+S VIK F+EPPH+
Sbjct: 636 SPQKQQTPDVPISRLVYLNKPEVPVLIAGAIAAIINGVIFPIFGILISRVIKTFFEPPHE 695

Query: 138 LRKDTKFWAIIFVLFGLIQLVVCPIKSYMFGVAGHKLIRRIRLMCF 1
           LRKD+KFWA++F+  GL   VV P ++Y+F VAG KLI+RIR MCF
Sbjct: 696 LRKDSKFWALMFMTLGLASFVVYPSQTYLFSVAGCKLIQRIRSMCF 741


>ref|NP_171753.1| P-glycoprotein 11 [Arabidopsis thaliana]
            gi|75334433|sp|Q9FWX7.1|AB11B_ARATH RecName: Full=ABC
            transporter B family member 11; Short=ABC transporter
            ABCB.11; Short=AtABCB11; AltName: Full=Multidrug
            resistance protein 8; AltName: Full=P-glycoprotein 11
            gi|9972378|gb|AAG10628.1|AC022521_6 Putative ABC
            transporter [Arabidopsis thaliana]
            gi|332189319|gb|AEE27440.1| P-glycoprotein 11
            [Arabidopsis thaliana]
          Length = 1278

 Score =  131 bits (329), Expect = 7e-29
 Identities = 61/106 (57%), Positives = 83/106 (78%)
 Frame = -3

Query: 318  SSEKEKPPKVSILRLGNLNKPEAGFLMVGTVSAIINGAIMPVFGILLSHVIKAFYEPPHK 139
            ++ +E  PKVS+ R+  LNKPE   L++GTV+A INGAI P+FGIL+S VI+AF++P H+
Sbjct: 685  TASQEPLPKVSLTRIAALNKPEIPVLLLGTVAAAINGAIFPLFGILISRVIEAFFKPAHE 744

Query: 138  LRKDTKFWAIIFVLFGLIQLVVCPIKSYMFGVAGHKLIRRIRLMCF 1
            L++D++FWAIIFV  G+  L+V P + Y+F VAG KLIRRIR MCF
Sbjct: 745  LKRDSRFWAIIFVALGVTSLIVSPTQMYLFAVAGGKLIRRIRSMCF 790


Top