BLASTX nr result

ID: Scutellaria22_contig00027380 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00027380
         (273 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272718.2| PREDICTED: Fanconi anemia group J protein-li...   147   7e-34
emb|CAN84083.1| hypothetical protein VITISV_018998 [Vitis vinifera]   147   7e-34
gb|AAF80633.1|AC069251_26 F2D10.24 [Arabidopsis thaliana]             146   2e-33
ref|NP_173498.3| RAD3-like DNA-binding helicase protein [Arabido...   146   2e-33
ref|XP_002893128.1| hypothetical protein ARALYDRAFT_472311 [Arab...   144   7e-33

>ref|XP_002272718.2| PREDICTED: Fanconi anemia group J protein-like [Vitis vinifera]
          Length = 1255

 Score =  147 bits (372), Expect = 7e-34
 Identities = 70/94 (74%), Positives = 79/94 (84%), Gaps = 4/94 (4%)
 Frame = +3

Query: 3   RFVKKDDGG----WTTTFSFWCLNPAVVFKSIAEFSQSVILTSGTLSPLNTFSSELGVQF 170
           R+VKKD G     WT TFS WCLNPAVVF+ IA+ S SVILTSGTLSP+++FSSELGVQF
Sbjct: 436 RYVKKDAGSVAGSWTCTFSLWCLNPAVVFRGIADLSLSVILTSGTLSPMHSFSSELGVQF 495

Query: 171 GTCLEAPHVIDVDSQVWAAAISNGPGNYPLNASY 272
           GTCLEAPHVID++SQ+WAA  S  PGNYPLNASY
Sbjct: 496 GTCLEAPHVIDIESQLWAAIFSTSPGNYPLNASY 529


>emb|CAN84083.1| hypothetical protein VITISV_018998 [Vitis vinifera]
          Length = 1261

 Score =  147 bits (372), Expect = 7e-34
 Identities = 70/94 (74%), Positives = 79/94 (84%), Gaps = 4/94 (4%)
 Frame = +3

Query: 3   RFVKKDDGG----WTTTFSFWCLNPAVVFKSIAEFSQSVILTSGTLSPLNTFSSELGVQF 170
           R+VKKD G     WT TFS WCLNPAVVF+ IA+ S SVILTSGTLSP+++FSSELGVQF
Sbjct: 374 RYVKKDAGSVAGSWTCTFSLWCLNPAVVFRGIADLSLSVILTSGTLSPMHSFSSELGVQF 433

Query: 171 GTCLEAPHVIDVDSQVWAAAISNGPGNYPLNASY 272
           GTCLEAPHVID++SQ+WAA  S  PGNYPLNASY
Sbjct: 434 GTCLEAPHVIDIESQLWAAIFSTSPGNYPLNASY 467


>gb|AAF80633.1|AC069251_26 F2D10.24 [Arabidopsis thaliana]
          Length = 1119

 Score =  146 bits (368), Expect = 2e-33
 Identities = 66/90 (73%), Positives = 76/90 (84%)
 Frame = +3

Query: 3   RFVKKDDGGWTTTFSFWCLNPAVVFKSIAEFSQSVILTSGTLSPLNTFSSELGVQFGTCL 182
           R  K+ D GWT TFS WC+NP+VVFK +A+ S S+ILTSGTLSP+N+FSSELG+QFGTCL
Sbjct: 371 RSAKRGDNGWTNTFSLWCMNPSVVFKDLADLSLSIILTSGTLSPMNSFSSELGMQFGTCL 430

Query: 183 EAPHVIDVDSQVWAAAISNGPGNYPLNASY 272
           EAPHVID + QVWA AIS  PGNYPLNASY
Sbjct: 431 EAPHVIDPNMQVWAGAISTVPGNYPLNASY 460


>ref|NP_173498.3| RAD3-like DNA-binding helicase protein [Arabidopsis thaliana]
           gi|332191897|gb|AEE30018.1| RAD3-like DNA-binding
           helicase protein [Arabidopsis thaliana]
          Length = 1144

 Score =  146 bits (368), Expect = 2e-33
 Identities = 66/90 (73%), Positives = 76/90 (84%)
 Frame = +3

Query: 3   RFVKKDDGGWTTTFSFWCLNPAVVFKSIAEFSQSVILTSGTLSPLNTFSSELGVQFGTCL 182
           R  K+ D GWT TFS WC+NP+VVFK +A+ S S+ILTSGTLSP+N+FSSELG+QFGTCL
Sbjct: 387 RSAKRGDNGWTNTFSLWCMNPSVVFKDLADLSLSIILTSGTLSPMNSFSSELGMQFGTCL 446

Query: 183 EAPHVIDVDSQVWAAAISNGPGNYPLNASY 272
           EAPHVID + QVWA AIS  PGNYPLNASY
Sbjct: 447 EAPHVIDPNMQVWAGAISTVPGNYPLNASY 476


>ref|XP_002893128.1| hypothetical protein ARALYDRAFT_472311 [Arabidopsis lyrata subsp.
           lyrata] gi|297338970|gb|EFH69387.1| hypothetical protein
           ARALYDRAFT_472311 [Arabidopsis lyrata subsp. lyrata]
          Length = 1138

 Score =  144 bits (363), Expect = 7e-33
 Identities = 64/84 (76%), Positives = 75/84 (89%)
 Frame = +3

Query: 21  DGGWTTTFSFWCLNPAVVFKSIAEFSQSVILTSGTLSPLNTFSSELGVQFGTCLEAPHVI 200
           D GWT TFS WC+NP+VVFK +A+ S S+ILTSGTLSP+N+FSSELG+QFGTCLEAPHVI
Sbjct: 430 DNGWTHTFSLWCMNPSVVFKDLADLSLSIILTSGTLSPMNSFSSELGMQFGTCLEAPHVI 489

Query: 201 DVDSQVWAAAISNGPGNYPLNASY 272
           D + QVWA AIS+GPGN+PLNASY
Sbjct: 490 DPNMQVWAGAISSGPGNFPLNASY 513


Top