BLASTX nr result

ID: Scutellaria22_contig00027344 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00027344
         (968 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004163016.1| PREDICTED: DNA polymerase epsilon subunit 2-...   266   1e-72
ref|XP_002318325.1| predicted protein [Populus trichocarpa] gi|2...   274   2e-71
ref|XP_004151563.1| PREDICTED: DNA polymerase epsilon subunit 2-...   266   2e-71
ref|XP_002267181.1| PREDICTED: DNA polymerase epsilon subunit 2-...   272   1e-70
ref|XP_002531023.1| DNA polymerase epsilon subunit B, putative [...   272   1e-70

>ref|XP_004163016.1| PREDICTED: DNA polymerase epsilon subunit 2-like [Cucumis sativus]
          Length = 536

 Score =  266 bits (679), Expect(2) = 1e-72
 Identities = 147/269 (54%), Positives = 176/269 (65%), Gaps = 32/269 (11%)
 Frame = -2

Query: 892  FFGGGSLTK*ETIRLAELERGAVNDMFVILSDVWLDNEER--RLWKNLRSFS-------- 743
            FFG G L K ET+R A+LE+ AVNDMFVILSD+WLD+EE   +L   L  F         
Sbjct: 268  FFGDGVLPKEETLRRADLEKKAVNDMFVILSDIWLDSEEAMGKLETILDGFENVEVVPSL 327

Query: 742  VVTKKRMWSHLCLFLWETFVLVHVTFPLI------HTRASDLSL---------GS*ESWL 608
             V      SH C   + +F  + + F  +      H R ++ S              + L
Sbjct: 328  FVLMGNFCSHPCNIAFNSFSSLRLQFGKLGKMIAAHPRLNEHSKFLFIPGPDDAGPSTVL 387

Query: 607  QLINV*KSIADLFSFLVLMI-------KIKFYTQEIVFFRQDMLYRMRRSCLMPPSTEET 449
                + K + +     V          +++FYTQEIVFFRQD+LYRMRRSCL+PPSTEET
Sbjct: 388  PRCALPKYLTEELQMHVSNAIFSSNPCRVRFYTQEIVFFRQDLLYRMRRSCLIPPSTEET 447

Query: 448  SDPFEHLVATINHQSHLCPLPLSVQPIIWNFDHCLHLYPTPQTIVLGDRSEQKAFKYTGT 269
            SDPFEHLVATI HQSHLCPLPL +QPIIWN+DHCLHLYPTP  IVLGDRS+Q+AFKYTG 
Sbjct: 448  SDPFEHLVATITHQSHLCPLPLVIQPIIWNYDHCLHLYPTPHVIVLGDRSKQQAFKYTGI 507

Query: 268  TCFNPGSFSNDFTFVAYRPCSQEVELSAV 182
            TCFNPGSF+ND TFVAYRPC+QEVELSA+
Sbjct: 508  TCFNPGSFTNDSTFVAYRPCNQEVELSAL 536



 Score = 34.7 bits (78), Expect(2) = 1e-72
 Identities = 15/26 (57%), Positives = 17/26 (65%)
 Frame = -3

Query: 966 FQVKTCGFPPLENLENSVSTFSGIDF 889
           FQV TCGFPPLE    S+   +G DF
Sbjct: 243 FQVVTCGFPPLEERGKSLKLLAGQDF 268


>ref|XP_002318325.1| predicted protein [Populus trichocarpa] gi|222858998|gb|EEE96545.1|
            predicted protein [Populus trichocarpa]
          Length = 518

 Score =  274 bits (701), Expect = 2e-71
 Identities = 152/269 (56%), Positives = 177/269 (65%), Gaps = 32/269 (11%)
 Frame = -2

Query: 892  FFGGGSLTK*ETIRLAELERGAVNDMFVILSDVWLDNEER--RLWKNLRSFS-------- 743
            FFGGG+LTK ET+RLAELE+ ++NDMFVILSD+W+D+EE   +L   L  F         
Sbjct: 250  FFGGGTLTKEETLRLAELEKRSLNDMFVILSDIWVDSEEAMGKLETVLDGFESQEVVPSL 309

Query: 742  VVTKKRMWSHLCLFLWETFVLVHVTFPLI------HTRASDLSL---------GS*ESWL 608
             V      SH C   + +F  +   F  +      H R  + S              + L
Sbjct: 310  FVFMGNFCSHPCNLSFHSFSSLRSQFGKLGQMIGAHQRLKEHSRFMFIPGPEDAGPSTVL 369

Query: 607  QLINV*KSIADLFS-------FLVLMIKIKFYTQEIVFFRQDMLYRMRRSCLMPPSTEET 449
                + K + +          F     ++KFYTQEIVFFR D+LYRMRRSCLMPPSTEET
Sbjct: 370  PRCPLPKYLTEELQKHIPNAIFASNPCRVKFYTQEIVFFRHDLLYRMRRSCLMPPSTEET 429

Query: 448  SDPFEHLVATINHQSHLCPLPLSVQPIIWNFDHCLHLYPTPQTIVLGDRSEQKAFKYTGT 269
             DPFEHLVATI HQSHLCPLPL VQPIIWN+DHCLHLYP+P TIVLGDRSEQKAFKYTG 
Sbjct: 430  DDPFEHLVATITHQSHLCPLPLIVQPIIWNYDHCLHLYPSPHTIVLGDRSEQKAFKYTGI 489

Query: 268  TCFNPGSFSNDFTFVAYRPCSQEVELSAV 182
            TCFNPGSFSND TFVAYRPC+QEVELSA+
Sbjct: 490  TCFNPGSFSNDSTFVAYRPCTQEVELSAL 518


>ref|XP_004151563.1| PREDICTED: DNA polymerase epsilon subunit 2-like, partial [Cucumis
           sativus]
          Length = 292

 Score =  266 bits (679), Expect(2) = 2e-71
 Identities = 147/269 (54%), Positives = 176/269 (65%), Gaps = 32/269 (11%)
 Frame = -2

Query: 892 FFGGGSLTK*ETIRLAELERGAVNDMFVILSDVWLDNEER--RLWKNLRSFS-------- 743
           FFG G L K ET+R A+LE+ AVNDMFVILSD+WLD+EE   +L   L  F         
Sbjct: 24  FFGDGVLPKEETLRRADLEKKAVNDMFVILSDIWLDSEEAMGKLETILDGFENVEVVPSL 83

Query: 742 VVTKKRMWSHLCLFLWETFVLVHVTFPLI------HTRASDLSL---------GS*ESWL 608
            V      SH C   + +F  + + F  +      H R ++ S              + L
Sbjct: 84  FVLMGNFCSHPCNIAFNSFSSLRLQFGKLGKMIAAHPRLNEHSKFLFIPGPDDAGPSTVL 143

Query: 607 QLINV*KSIADLFSFLVLMI-------KIKFYTQEIVFFRQDMLYRMRRSCLMPPSTEET 449
               + K + +     V          +++FYTQEIVFFRQD+LYRMRRSCL+PPSTEET
Sbjct: 144 PRCALPKYLTEELQMHVSNAIFSSNPCRVRFYTQEIVFFRQDLLYRMRRSCLIPPSTEET 203

Query: 448 SDPFEHLVATINHQSHLCPLPLSVQPIIWNFDHCLHLYPTPQTIVLGDRSEQKAFKYTGT 269
           SDPFEHLVATI HQSHLCPLPL +QPIIWN+DHCLHLYPTP  IVLGDRS+Q+AFKYTG 
Sbjct: 204 SDPFEHLVATITHQSHLCPLPLVIQPIIWNYDHCLHLYPTPHVIVLGDRSKQQAFKYTGI 263

Query: 268 TCFNPGSFSNDFTFVAYRPCSQEVELSAV 182
           TCFNPGSF+ND TFVAYRPC+QEVELSA+
Sbjct: 264 TCFNPGSFTNDSTFVAYRPCNQEVELSAL 292



 Score = 30.4 bits (67), Expect(2) = 2e-71
 Identities = 13/24 (54%), Positives = 15/24 (62%)
 Frame = -3

Query: 960 VKTCGFPPLENLENSVSTFSGIDF 889
           V TCGFPPLE    S+   +G DF
Sbjct: 1   VVTCGFPPLEERGKSLKLLAGQDF 24


>ref|XP_002267181.1| PREDICTED: DNA polymerase epsilon subunit 2-like [Vitis vinifera]
          Length = 527

 Score =  272 bits (695), Expect = 1e-70
 Identities = 152/269 (56%), Positives = 177/269 (65%), Gaps = 32/269 (11%)
 Frame = -2

Query: 892  FFGGGSLTK*ETIRLAELERGAVNDMFVILSDVWLDNEERR-----LWKNLRSFSVVTKK 728
            FFGGG+LT+ ET+RLA LE+ AVNDMFVILSDVWLDNEE       +     +  VV   
Sbjct: 259  FFGGGTLTREETLRLAGLEKKAVNDMFVILSDVWLDNEETMGKLATVLDGYENVEVVPSL 318

Query: 727  RMW-----SHLCLFLWETFVLVHVTFPLI------HTRASDLSL---------GS*ESWL 608
             ++     SH C   + +F  + + F  +      H R  + S              + L
Sbjct: 319  FIFMGNFCSHPCNLSFHSFSSLRLQFGKLGQMIASHPRLKEHSQFLFIPGPDDAGPSTVL 378

Query: 607  QLINV*KSIADLFS-------FLVLMIKIKFYTQEIVFFRQDMLYRMRRSCLMPPSTEET 449
                +   + + F        F     +IKFYTQEIV FRQD+LYRMRRSCL+PPS EET
Sbjct: 379  PRCALPNYLTEEFKKYIPNAIFSSNPCRIKFYTQEIVLFRQDLLYRMRRSCLVPPSPEET 438

Query: 448  SDPFEHLVATINHQSHLCPLPLSVQPIIWNFDHCLHLYPTPQTIVLGDRSEQKAFKYTGT 269
            SDPFEHLVATI HQSHLCPLPLSVQPIIWN+DHCLHLYP P TIVLGDRSEQKAFKYTG 
Sbjct: 439  SDPFEHLVATITHQSHLCPLPLSVQPIIWNYDHCLHLYPNPHTIVLGDRSEQKAFKYTGI 498

Query: 268  TCFNPGSFSNDFTFVAYRPCSQEVELSAV 182
             CFNPGSFSN+ TFVAYRPC+QEVELSA+
Sbjct: 499  MCFNPGSFSNESTFVAYRPCTQEVELSAL 527


>ref|XP_002531023.1| DNA polymerase epsilon subunit B, putative [Ricinus communis]
            gi|223529398|gb|EEF31361.1| DNA polymerase epsilon
            subunit B, putative [Ricinus communis]
          Length = 536

 Score =  272 bits (695), Expect = 1e-70
 Identities = 152/270 (56%), Positives = 179/270 (66%), Gaps = 33/270 (12%)
 Frame = -2

Query: 892  FFGGGSLTK*ETIRLAELERGAVNDMFVILSDVWLDNEER--RLWKNLRSFSV------- 740
            FFGGGSLTK ET+ L ELE  AVNDMFVILSD+WLD+EE   +L   L  F +       
Sbjct: 268  FFGGGSLTKEETLGLEELECKAVNDMFVILSDIWLDSEEAMGKLEMVLDGFEIQEVVPSL 327

Query: 739  -VTKKRMWSHLCLFLWETFVLVHVTFPLI------HTRASDLSL-----GS*ESWLQLI- 599
             V      SH C   + +F  + + F  +      H R  + S      G  ++    + 
Sbjct: 328  FVFMGNFCSHPCNLSFHSFSTLRLQFGKLGKMIAAHQRLKEHSRFLFIPGPDDAGPSTVL 387

Query: 598  -----------NV*KSIADLFSFLVLMIKIKFYTQEIVFFRQDMLYRMRRSCLMPPSTEE 452
                       ++ K I +   F     ++KFYTQEIVFFR D+LYRM RSCLMPPSTEE
Sbjct: 388  PRCALPKYLTEDLQKHIPNAI-FSTNPCRVKFYTQEIVFFRHDLLYRMHRSCLMPPSTEE 446

Query: 451  TSDPFEHLVATINHQSHLCPLPLSVQPIIWNFDHCLHLYPTPQTIVLGDRSEQKAFKYTG 272
            T+DPFEHLVATI HQSHLCPLPL VQPIIWN+DHCLHLYP+P TIVLGD+SEQKAFKYTG
Sbjct: 447  TADPFEHLVATITHQSHLCPLPLIVQPIIWNYDHCLHLYPSPHTIVLGDKSEQKAFKYTG 506

Query: 271  TTCFNPGSFSNDFTFVAYRPCSQEVELSAV 182
             TCFNPGSFSND TFVAYRPC+QEVELS++
Sbjct: 507  ITCFNPGSFSNDSTFVAYRPCTQEVELSSL 536


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