BLASTX nr result

ID: Scutellaria22_contig00027081 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00027081
         (266 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003553291.1| PREDICTED: pentatricopeptide repeat-containi...    91   1e-16
ref|XP_004149831.1| PREDICTED: pentatricopeptide repeat-containi...    89   3e-16
ref|XP_002887681.1| binding protein [Arabidopsis lyrata subsp. l...    84   1e-14
ref|XP_002279168.1| PREDICTED: pentatricopeptide repeat-containi...    82   3e-14
emb|CBI15606.3| unnamed protein product [Vitis vinifera]               82   3e-14

>ref|XP_003553291.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g77405-like [Glycine max]
          Length = 732

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 46/88 (52%), Positives = 59/88 (67%), Gaps = 3/88 (3%)
 Frame = +3

Query: 9   HLTAQVLSAIIQNKPFNTFPPPKQHI---WTSGTVIQVLRSIPLYLFQSPRSIGRQKTFR 179
           HL +Q L  +I++ PF+  PPP       WT+  V +VLR I  Y  QSPRSIGRQ TFR
Sbjct: 299 HLASQTLVLVIKDLPFDAHPPPPSPSPPPWTNDAVTEVLRLISRYTLQSPRSIGRQHTFR 358

Query: 180 HRSPLKQRNLRHEAVKYKNGSLILGPAA 263
           HR+PL+QRNL  E  K ++ +L+LGPAA
Sbjct: 359 HRTPLRQRNLNLEHHKLRSNTLLLGPAA 386


>ref|XP_004149831.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g77405-like [Cucumis sativus]
           gi|449518241|ref|XP_004166151.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At1g77405-like [Cucumis sativus]
          Length = 445

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 44/90 (48%), Positives = 60/90 (66%), Gaps = 6/90 (6%)
 Frame = +3

Query: 12  LTAQVLSAIIQNKPFNTF------PPPKQHIWTSGTVIQVLRSIPLYLFQSPRSIGRQKT 173
           L  Q+L A+++N+PF+T             +W+S +V  VLRS+P + FQS RSIG QK 
Sbjct: 14  LVDQILVAMLKNRPFDTHVHSAASTSTTHQLWSSDSVSDVLRSVPRFFFQSARSIGTQKG 73

Query: 174 FRHRSPLKQRNLRHEAVKYKNGSLILGPAA 263
           FRHR+PLKQR L+ EA K++N  L+LGP A
Sbjct: 74  FRHRTPLKQRKLKEEAYKFRNNVLVLGPGA 103


>ref|XP_002887681.1| binding protein [Arabidopsis lyrata subsp. lyrata]
           gi|297333522|gb|EFH63940.1| binding protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 459

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 44/83 (53%), Positives = 57/83 (68%), Gaps = 2/83 (2%)
 Frame = +3

Query: 21  QVLSAIIQNKPFNTFPPPKQ--HIWTSGTVIQVLRSIPLYLFQSPRSIGRQKTFRHRSPL 194
           Q+++A+IQN+PF+         + WT   V  VLRSIP + F SPRSIGRQK FRHRSPL
Sbjct: 14  QLIAAMIQNRPFDAVLASSTVANPWTQQLVSDVLRSIPRFFFISPRSIGRQKGFRHRSPL 73

Query: 195 KQRNLRHEAVKYKNGSLILGPAA 263
           KQRNL  E+ + ++  L+LGP A
Sbjct: 74  KQRNLSDESQRRRSEVLVLGPGA 96


>ref|XP_002279168.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g77405-like [Vitis vinifera]
          Length = 432

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 44/76 (57%), Positives = 52/76 (68%), Gaps = 1/76 (1%)
 Frame = +3

Query: 6   SHLTAQVLSAIIQNKPFNTFPPPK-QHIWTSGTVIQVLRSIPLYLFQSPRSIGRQKTFRH 182
           S L  QVL+A++QN P +  P       WT+ +V +VLRSIP   FQSPRSIGRQK FRH
Sbjct: 12  SSLVKQVLAAMVQNCPLDASPNKSCNQPWTTDSVSEVLRSIPRLFFQSPRSIGRQKGFRH 71

Query: 183 RSPLKQRNLRHEAVKY 230
           RSPLKQRNL  E  K+
Sbjct: 72  RSPLKQRNLYQEPNKF 87


>emb|CBI15606.3| unnamed protein product [Vitis vinifera]
          Length = 381

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 44/76 (57%), Positives = 52/76 (68%), Gaps = 1/76 (1%)
 Frame = +3

Query: 6   SHLTAQVLSAIIQNKPFNTFPPPK-QHIWTSGTVIQVLRSIPLYLFQSPRSIGRQKTFRH 182
           S L  QVL+A++QN P +  P       WT+ +V +VLRSIP   FQSPRSIGRQK FRH
Sbjct: 12  SSLVKQVLAAMVQNCPLDASPNKSCNQPWTTDSVSEVLRSIPRLFFQSPRSIGRQKGFRH 71

Query: 183 RSPLKQRNLRHEAVKY 230
           RSPLKQRNL  E  K+
Sbjct: 72  RSPLKQRNLYQEPNKF 87


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