BLASTX nr result

ID: Scutellaria22_contig00025467 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00025467
         (450 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002514548.1| rubisco subunit binding-protein beta subunit...    79   1e-23
ref|XP_002269341.2| PREDICTED: chaperonin 60 subunit beta 4, chl...    79   6e-21
ref|XP_003520145.1| PREDICTED: ruBisCO large subunit-binding pro...    77   3e-20
gb|ABK24483.1| unknown [Picea sitchensis]                              70   3e-18
ref|XP_002890669.1| hypothetical protein ARALYDRAFT_890123 [Arab...    75   2e-17

>ref|XP_002514548.1| rubisco subunit binding-protein beta subunit, rubb, putative
           [Ricinus communis] gi|223546152|gb|EEF47654.1| rubisco
           subunit binding-protein beta subunit, rubb, putative
           [Ricinus communis]
          Length = 592

 Score = 79.0 bits (193), Expect(2) = 1e-23
 Identities = 36/42 (85%), Positives = 40/42 (95%)
 Frame = -1

Query: 126 AGVNKVAELIGVTMGPKGRNVMLQNKYGPPKIVNDGETVLKQ 1
           AGV  VAEL+GVT+GPKGRNV+L+NKYGPPKIVNDGETVLKQ
Sbjct: 54  AGVGMVAELVGVTLGPKGRNVVLENKYGPPKIVNDGETVLKQ 95



 Score = 55.8 bits (133), Expect(2) = 1e-23
 Identities = 26/47 (55%), Positives = 36/47 (76%)
 Frame = -3

Query: 343 PFSAVAFTNQSLPTTLSKKPSNSTLNARAVGKELYLNHDGSATKKLV 203
           P SA++FTNQ+ P  +S  PS+S L  +A+ K++Y NHDGSATKKL+
Sbjct: 8   PISAISFTNQTFPKRVSS-PSSSMLYLKAMSKDIYFNHDGSATKKLL 53


>ref|XP_002269341.2| PREDICTED: chaperonin 60 subunit beta 4, chloroplastic-like [Vitis
           vinifera]
          Length = 610

 Score = 79.3 bits (194), Expect(2) = 6e-21
 Identities = 36/42 (85%), Positives = 41/42 (97%)
 Frame = -1

Query: 126 AGVNKVAELIGVTMGPKGRNVMLQNKYGPPKIVNDGETVLKQ 1
           AGV+ VAEL+GVT+GPKGRNV+LQNKYGPPKIVNDGETVLK+
Sbjct: 45  AGVDMVAELVGVTLGPKGRNVVLQNKYGPPKIVNDGETVLKE 86



 Score = 46.2 bits (108), Expect(2) = 6e-21
 Identities = 24/44 (54%), Positives = 31/44 (70%)
 Frame = -3

Query: 337 SAVAFTNQSLPTTLSKKPSNSTLNARAVGKELYLNHDGSATKKL 206
           SA++F+N +LP    +  S +  N RA+ KELY NHDGSATKKL
Sbjct: 3   SALSFSNLTLPR---RSFSTTAWNPRAMAKELYFNHDGSATKKL 43


>ref|XP_003520145.1| PREDICTED: ruBisCO large subunit-binding protein subunit beta,
           chloroplastic-like [Glycine max]
          Length = 646

 Score = 76.6 bits (187), Expect(2) = 3e-20
 Identities = 35/42 (83%), Positives = 40/42 (95%)
 Frame = -1

Query: 126 AGVNKVAELIGVTMGPKGRNVMLQNKYGPPKIVNDGETVLKQ 1
           AGV+ VAEL+GVT+GPKGRNV+L NKYGPPKIVNDGETVLK+
Sbjct: 49  AGVDMVAELLGVTLGPKGRNVVLPNKYGPPKIVNDGETVLKE 90



 Score = 46.6 bits (109), Expect(2) = 3e-20
 Identities = 23/45 (51%), Positives = 30/45 (66%)
 Frame = -3

Query: 337 SAVAFTNQSLPTTLSKKPSNSTLNARAVGKELYLNHDGSATKKLV 203
           S+  F N S    L    S+S+++ RA+ KELY NHDGSATKKL+
Sbjct: 4   SSFTFANPSSIPRLRNSLSSSSISPRAMAKELYFNHDGSATKKLL 48


>gb|ABK24483.1| unknown [Picea sitchensis]
          Length = 617

 Score = 70.5 bits (171), Expect(2) = 3e-18
 Identities = 31/42 (73%), Positives = 39/42 (92%)
 Frame = -1

Query: 126 AGVNKVAELIGVTMGPKGRNVMLQNKYGPPKIVNDGETVLKQ 1
           AGVNK+A+L+GVT+GPKGRNV+L++KYG PKIVNDG TV K+
Sbjct: 90  AGVNKLADLVGVTLGPKGRNVVLESKYGSPKIVNDGVTVAKE 131



 Score = 46.2 bits (108), Expect(2) = 3e-18
 Identities = 23/49 (46%), Positives = 29/49 (59%)
 Frame = -3

Query: 352 SLKPFSAVAFTNQSLPTTLSKKPSNSTLNARAVGKELYLNHDGSATKKL 206
           SL  FS ++F   S   T+  +     +N RA+ KELY N DGSATKKL
Sbjct: 40  SLSAFSPISFNRLSRRQTMRLRNREQVVNTRAMAKELYFNKDGSATKKL 88


>ref|XP_002890669.1| hypothetical protein ARALYDRAFT_890123 [Arabidopsis lyrata subsp.
           lyrata] gi|297336511|gb|EFH66928.1| hypothetical protein
           ARALYDRAFT_890123 [Arabidopsis lyrata subsp. lyrata]
          Length = 538

 Score = 75.5 bits (184), Expect(2) = 2e-17
 Identities = 33/42 (78%), Positives = 40/42 (95%)
 Frame = -1

Query: 126 AGVNKVAELIGVTMGPKGRNVMLQNKYGPPKIVNDGETVLKQ 1
           AG + VA+L+GVT+GPKGRN++LQNKYGPPKIVNDGETVLK+
Sbjct: 49  AGADMVAKLLGVTLGPKGRNIVLQNKYGPPKIVNDGETVLKE 90



 Score = 38.1 bits (87), Expect(2) = 2e-17
 Identities = 22/46 (47%), Positives = 30/46 (65%), Gaps = 2/46 (4%)
 Frame = -3

Query: 337 SAVAFTNQSLPTTLSKKPSNST--LNARAVGKELYLNHDGSATKKL 206
           SA+ F+++    T  KKPS+S   L ARA  KE++ N DG+ TKKL
Sbjct: 6   SALPFSDR----TFRKKPSSSNFFLRARAAAKEVHFNRDGAVTKKL 47


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