BLASTX nr result

ID: Scutellaria22_contig00025464 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00025464
         (306 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632466.1| PREDICTED: pentatricopeptide repeat-containi...    92   4e-17
ref|XP_003542017.1| PREDICTED: pentatricopeptide repeat-containi...    84   1e-14
ref|XP_002324099.1| predicted protein [Populus trichocarpa] gi|2...    82   4e-14
ref|XP_002522334.1| pentatricopeptide repeat-containing protein,...    73   3e-11
ref|XP_002869013.1| pentatricopeptide repeat-containing protein ...    69   5e-10

>ref|XP_003632466.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g37170-like, partial [Vitis vinifera]
          Length = 621

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 49/102 (48%), Positives = 69/102 (67%), Gaps = 2/102 (1%)
 Frame = +1

Query: 4   SSKAHLTQSTKPV--KSFLRSSRNEEPLIILSERDGKFSESVNHLCQQKRFKDLVQLLED 177
           SS     Q +KP    +F +S   +E L+    +D  F E+++ LC+QKR ++ +Q+L D
Sbjct: 25  SSTTSQPQLSKPPIHNTFFKSGAKDE-LVKRLCKDNNFKEAIDILCEQKRLREAIQIL-D 82

Query: 178 HLSQPSAALYSTILQLCIEKRALKEGQRVHAHIKGSGFVPGV 303
           H+ +PSAA YST+LQLC++ RAL EG +VHAH K SGFVPGV
Sbjct: 83  HVDRPSAATYSTLLQLCLQLRALDEGMKVHAHTKTSGFVPGV 124


>ref|XP_003542017.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g37170-like [Glycine max]
          Length = 693

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 45/87 (51%), Positives = 58/87 (66%), Gaps = 1/87 (1%)
 Frame = +1

Query: 49  FLRSSRNE-EPLIILSERDGKFSESVNHLCQQKRFKDLVQLLEDHLSQPSAALYSTILQL 225
           F    RN   P  ++SE D KF E+V+ LCQQKR K+ V+LL     +PSA +YST++  
Sbjct: 38  FRNDKRNHLNPKDLVSE-DNKFEEAVDVLCQQKRVKEAVELLHRTDHRPSARVYSTLIAA 96

Query: 226 CIEKRALKEGQRVHAHIKGSGFVPGVF 306
           C+  RAL+ G+RVHAH K S FVPGVF
Sbjct: 97  CVRHRALELGRRVHAHTKASNFVPGVF 123


>ref|XP_002324099.1| predicted protein [Populus trichocarpa] gi|222867101|gb|EEF04232.1|
           predicted protein [Populus trichocarpa]
          Length = 676

 Score = 82.0 bits (201), Expect = 4e-14
 Identities = 40/98 (40%), Positives = 67/98 (68%)
 Frame = +1

Query: 13  AHLTQSTKPVKSFLRSSRNEEPLIILSERDGKFSESVNHLCQQKRFKDLVQLLEDHLSQP 192
           +H +   +P K+F +S+  +  L+       +F E+++ LCQQ R K+ +Q+L   + +P
Sbjct: 11  SHSSSPFQP-KTFFKSNTKDTTLVPHLCNHKRFDEAIHILCQQNRLKEALQILHQ-IDKP 68

Query: 193 SAALYSTILQLCIEKRALKEGQRVHAHIKGSGFVPGVF 306
           SA++YST++Q CI+ R L++G++VH HIK SGFVPG+F
Sbjct: 69  SASVYSTLIQSCIKSRLLQQGKKVHQHIKLSGFVPGLF 106


>ref|XP_002522334.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223538412|gb|EEF40018.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 507

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 30/68 (44%), Positives = 53/68 (77%)
 Frame = +1

Query: 100 DGKFSESVNHLCQQKRFKDLVQLLEDHLSQPSAALYSTILQLCIEKRALKEGQRVHAHIK 279
           +G+F E++  LC+Q R K+ +Q+L + + +PS ++YS+++Q C++ RAL+ G++VH HIK
Sbjct: 49  EGRFKEAIALLCEQNRLKEAIQVL-NQIDRPSPSIYSSLIQSCLKNRALEVGKKVHDHIK 107

Query: 280 GSGFVPGV 303
            SGF+PG+
Sbjct: 108 LSGFIPGL 115


>ref|XP_002869013.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297314849|gb|EFH45272.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 693

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 36/100 (36%), Positives = 60/100 (60%), Gaps = 1/100 (1%)
 Frame = +1

Query: 7   SKAHLTQSTKPVKSFLRSSRNEEPLIILSE-RDGKFSESVNHLCQQKRFKDLVQLLEDHL 183
           S ++ +Q     K F  S   +  +++    R  +F E+++ LC QK  ++ VQLL    
Sbjct: 24  SSSYASQKRFSDKKFFDSKLEDGGVVVERLCRANRFGEAIDVLCGQKLLREAVQLL-GRA 82

Query: 184 SQPSAALYSTILQLCIEKRALKEGQRVHAHIKGSGFVPGV 303
            +P A+ Y  ++Q+C + RAL+EG++VH HI+ SGFVPG+
Sbjct: 83  KKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGI 122


Top