BLASTX nr result

ID: Scutellaria22_contig00025231 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00025231
         (371 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004140069.1| PREDICTED: pentatricopeptide repeat-containi...   162   3e-38
ref|XP_002530223.1| pentatricopeptide repeat-containing protein,...   155   3e-36
ref|XP_002269867.1| PREDICTED: pentatricopeptide repeat-containi...   150   1e-34
ref|NP_194398.1| pentatricopeptide repeat-containing protein [Ar...   150   1e-34
ref|XP_002869597.1| pentatricopeptide repeat-containing protein ...   149   3e-34

>ref|XP_004140069.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
           mitochondrial-like [Cucumis sativus]
           gi|449528063|ref|XP_004171026.1| PREDICTED:
           pentatricopeptide repeat-containing protein At4g26680,
           mitochondrial-like [Cucumis sativus]
          Length = 536

 Score =  162 bits (409), Expect = 3e-38
 Identities = 78/123 (63%), Positives = 98/123 (79%)
 Frame = -1

Query: 371 SLEFFKWVALKSSESNALDVISIILHVLTKNHKFKSAESILRRTLEAFSLELDFPRKIFE 192
           SLEFF WVA ++  S+ L+   IILH+LTK  KFKSAESILR  +E+ S+  DFP K+FE
Sbjct: 98  SLEFFNWVATQNPSSHTLETHCIILHILTKRRKFKSAESILRSIIESCSI--DFPSKLFE 155

Query: 191 ALVYSYKMCESSPRVFDALFKTHAHMKKFRNASDCFSWMKEYGFYPTIESCNAYLSALSS 12
           +L+YSY++C+SSP VFD LFKT AH+KKFRNASD F  MK+YGF PT+ESCNAYLS+L +
Sbjct: 156 SLLYSYRLCDSSPHVFDLLFKTFAHLKKFRNASDTFCRMKDYGFLPTVESCNAYLSSLLN 215

Query: 11  LNR 3
            +R
Sbjct: 216 FSR 218


>ref|XP_002530223.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223530270|gb|EEF32170.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 517

 Score =  155 bits (393), Expect = 3e-36
 Identities = 78/124 (62%), Positives = 97/124 (78%), Gaps = 1/124 (0%)
 Frame = -1

Query: 371 SLEFFKWVALKSSESNALDVISIILHVLTKNHKFKSAESILRRTL-EAFSLELDFPRKIF 195
           SLEFF WV  ++  S+ L+  S+ILH+LTKN KFKSAE IL+  L + F   +D P K+F
Sbjct: 76  SLEFFNWVQTENPSSHTLETHSMILHILTKNRKFKSAELILKSVLVKGF---IDLPDKLF 132

Query: 194 EALVYSYKMCESSPRVFDALFKTHAHMKKFRNASDCFSWMKEYGFYPTIESCNAYLSALS 15
           EA++YSY+MC+SSPRVFD+LFKT AHMKKFRNA+D F  MK YGF PT+ESCNAYLS+L 
Sbjct: 133 EAILYSYRMCDSSPRVFDSLFKTLAHMKKFRNATDTFLQMKGYGFLPTVESCNAYLSSLL 192

Query: 14  SLNR 3
            L+R
Sbjct: 193 DLHR 196


>ref|XP_002269867.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
           mitochondrial-like [Vitis vinifera]
          Length = 616

 Score =  150 bits (378), Expect = 1e-34
 Identities = 73/123 (59%), Positives = 92/123 (74%)
 Frame = -1

Query: 371 SLEFFKWVALKSSESNALDVISIILHVLTKNHKFKSAESILRRTLEAFSLELDFPRKIFE 192
           S EFF WV  ++     L+  SIILH+LTKNHKFKSAES+L+  L + S+  D P K+FE
Sbjct: 174 SFEFFNWVKAQNPNCQTLETYSIILHILTKNHKFKSAESVLKGILGSGSI--DHPSKLFE 231

Query: 191 ALVYSYKMCESSPRVFDALFKTHAHMKKFRNASDCFSWMKEYGFYPTIESCNAYLSALSS 12
           A++YSY++C+SSP VFD+LFKT+A MKK RNA D F  MK+YGF P +ESCNAY+SA  S
Sbjct: 232 AILYSYRICDSSPCVFDSLFKTYAQMKKLRNAIDVFCQMKDYGFLPRVESCNAYISASIS 291

Query: 11  LNR 3
           L R
Sbjct: 292 LQR 294


>ref|NP_194398.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|334186944|ref|NP_001190849.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
           gi|75213515|sp|Q9SZ10.1|PP338_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At4g26680, mitochondrial; Flags: Precursor
           gi|4455191|emb|CAB36514.1| putative protein [Arabidopsis
           thaliana] gi|7269520|emb|CAB79523.1| putative protein
           [Arabidopsis thaliana] gi|332659836|gb|AEE85236.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana] gi|332659837|gb|AEE85237.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 521

 Score =  150 bits (378), Expect = 1e-34
 Identities = 72/123 (58%), Positives = 94/123 (76%)
 Frame = -1

Query: 371 SLEFFKWVALKSSESNALDVISIILHVLTKNHKFKSAESILRRTLEAFSLELDFPRKIFE 192
           SLEFF W   ++  S++L+  +I+LH LTKN KFKSAESILR  L   +  +D P K+F+
Sbjct: 98  SLEFFNWAKTRNPGSHSLETHAIVLHTLTKNRKFKSAESILRDVL--VNGGVDLPAKVFD 155

Query: 191 ALVYSYKMCESSPRVFDALFKTHAHMKKFRNASDCFSWMKEYGFYPTIESCNAYLSALSS 12
           AL+YSY+ C+S+PRVFD+LFKT AH+KKFRNA+D F  MK+YGF PT+ESCNAY+S+L  
Sbjct: 156 ALLYSYRECDSTPRVFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLG 215

Query: 11  LNR 3
             R
Sbjct: 216 QGR 218


>ref|XP_002869597.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297315433|gb|EFH45856.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 538

 Score =  149 bits (375), Expect = 3e-34
 Identities = 71/123 (57%), Positives = 93/123 (75%)
 Frame = -1

Query: 371 SLEFFKWVALKSSESNALDVISIILHVLTKNHKFKSAESILRRTLEAFSLELDFPRKIFE 192
           S EFF W   ++  S++L+  +I+LH LTKN KFKSAESILR  L   +  +D P K+F+
Sbjct: 98  SFEFFNWAKTRNPASHSLETHAIVLHTLTKNRKFKSAESILRDVL--VNGGVDLPAKVFD 155

Query: 191 ALVYSYKMCESSPRVFDALFKTHAHMKKFRNASDCFSWMKEYGFYPTIESCNAYLSALSS 12
           AL+YSY+ C+S+PRVFD+LFKT AH+KKFRNA+D F  MK+YGF PT+ESCNAY+S+L  
Sbjct: 156 ALLYSYRECDSTPRVFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLG 215

Query: 11  LNR 3
             R
Sbjct: 216 QGR 218


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