BLASTX nr result

ID: Scutellaria22_contig00024923 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00024923
         (200 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI31619.3| unnamed protein product [Vitis vinifera]               75   7e-12
ref|XP_002282470.1| PREDICTED: X-linked retinitis pigmentosa GTP...    75   7e-12
ref|XP_002322918.1| predicted protein [Populus trichocarpa] gi|2...    71   8e-11
ref|XP_002524221.1| Serine/threonine-protein kinase Nek8, putati...    71   1e-10
ref|XP_004150638.1| PREDICTED: E3 ubiquitin-protein ligase HERC2...    69   5e-10

>emb|CBI31619.3| unnamed protein product [Vitis vinifera]
          Length = 461

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 37/66 (56%), Positives = 48/66 (72%)
 Frame = -2

Query: 199 GSFSSPNDKISGDETMKRRKVLNQEEFETSMPADETLSMPPCLVNLDPGVRISSVAAGGR 20
           G  S  + K  G+E+ KRR++L+ ++   S   DETLS  PCLV L+PGVRI++VAAGGR
Sbjct: 155 GGVSGTDSKGGGEESTKRRRMLSSKQAAESSSGDETLSALPCLVTLNPGVRIANVAAGGR 214

Query: 19  HTLALS 2
           HTLALS
Sbjct: 215 HTLALS 220


>ref|XP_002282470.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator [Vitis
           vinifera]
          Length = 484

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 37/66 (56%), Positives = 48/66 (72%)
 Frame = -2

Query: 199 GSFSSPNDKISGDETMKRRKVLNQEEFETSMPADETLSMPPCLVNLDPGVRISSVAAGGR 20
           G  S  + K  G+E+ KRR++L+ ++   S   DETLS  PCLV L+PGVRI++VAAGGR
Sbjct: 178 GGVSGTDSKGGGEESTKRRRMLSSKQAAESSSGDETLSALPCLVTLNPGVRIANVAAGGR 237

Query: 19  HTLALS 2
           HTLALS
Sbjct: 238 HTLALS 243


>ref|XP_002322918.1| predicted protein [Populus trichocarpa] gi|222867548|gb|EEF04679.1|
           predicted protein [Populus trichocarpa]
          Length = 467

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 37/65 (56%), Positives = 49/65 (75%)
 Frame = -2

Query: 196 SFSSPNDKISGDETMKRRKVLNQEEFETSMPADETLSMPPCLVNLDPGVRISSVAAGGRH 17
           S +S +DK +G+E +KRR+V  +EE E S   DE  ++ P +V+L PGVRI+SVAAGGRH
Sbjct: 160 SSASSDDKRNGEEIVKRRRVSLKEENENSEYGDEYFTVTPAIVSLGPGVRITSVAAGGRH 219

Query: 16  TLALS 2
           TLALS
Sbjct: 220 TLALS 224


>ref|XP_002524221.1| Serine/threonine-protein kinase Nek8, putative [Ricinus communis]
           gi|223536498|gb|EEF38145.1| Serine/threonine-protein
           kinase Nek8, putative [Ricinus communis]
          Length = 476

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 36/57 (63%), Positives = 46/57 (80%), Gaps = 1/57 (1%)
 Frame = -2

Query: 169 SGDETMKRRKVLN-QEEFETSMPADETLSMPPCLVNLDPGVRISSVAAGGRHTLALS 2
           SGDE+ KRR++ + ++  E+S   DETLS  PCLV L+PGVRI++VAAGGRHTLALS
Sbjct: 180 SGDESTKRRRISSAKQSAESSSSGDETLSALPCLVTLNPGVRITTVAAGGRHTLALS 236


>ref|XP_004150638.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Cucumis sativus]
           gi|449516435|ref|XP_004165252.1| PREDICTED: E3
           ubiquitin-protein ligase HERC2-like [Cucumis sativus]
          Length = 491

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 38/67 (56%), Positives = 48/67 (71%), Gaps = 1/67 (1%)
 Frame = -2

Query: 199 GSFSSPNDKISGDETMKRRKVLNQE-EFETSMPADETLSMPPCLVNLDPGVRISSVAAGG 23
           G  SS   +  G E+ KRR+V + +   E+S  +DETLS  PCLV L+PGVRI+SV+AGG
Sbjct: 184 GVVSSIEARAGGAESTKRRRVSSAKLAAESSSSSDETLSAVPCLVTLNPGVRITSVSAGG 243

Query: 22  RHTLALS 2
           RHTLALS
Sbjct: 244 RHTLALS 250


Top