BLASTX nr result

ID: Scutellaria22_contig00024494 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00024494
         (953 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004144853.1| PREDICTED: RNA-binding protein 39-like [Cucu...    79   2e-15
ref|XP_003536719.1| PREDICTED: RNA-binding protein 39-like [Glyc...    78   3e-12
gb|AFW89678.1| hypothetical protein ZEAMMB73_900995 [Zea mays]         77   5e-12
gb|AFW89676.1| hypothetical protein ZEAMMB73_900995 [Zea mays]         77   5e-12
gb|ACN28976.1| unknown [Zea mays] gi|413957028|gb|AFW89677.1| hy...    77   5e-12

>ref|XP_004144853.1| PREDICTED: RNA-binding protein 39-like [Cucumis sativus]
           gi|449506986|ref|XP_004162902.1| PREDICTED: RNA-binding
           protein 39-like [Cucumis sativus]
          Length = 562

 Score = 79.0 bits (193), Expect(2) = 2e-15
 Identities = 40/58 (68%), Positives = 43/58 (74%)
 Frame = +1

Query: 778 RRYXXXXXXXXXXXXXXQRDQRTVFAYQVSLKAGERDVYEFFSRAGKVRDVQLIMDRN 951
           RRY              +RDQRTVFAYQ+SLKA ERDVYEFFSRAGKVRDV+LIMDRN
Sbjct: 157 RRYKDKKDETAEPEADPERDQRTVFAYQISLKATERDVYEFFSRAGKVRDVRLIMDRN 214



 Score = 30.0 bits (66), Expect(2) = 2e-15
 Identities = 31/130 (23%), Positives = 46/130 (35%), Gaps = 3/130 (2%)
 Frame = +2

Query: 284 LRSRKESNDHEKDR---SSRHGPSSRDREKGEKDRHASSREHRIRNREGSNGXXXXXXXX 454
           L+S  ES D ++ R   SSRH   SR+R++   DRH SS+E+R   +E   G        
Sbjct: 29  LKSDDESRDRDRHRDRTSSRHRSRSRERDR---DRHRSSKENR--GKEDREGNREERSSK 83

Query: 455 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHLEKHLDEWGREKSKDAETIDT 634
                                                       D+  RE+S+D E  + 
Sbjct: 84  DRDVDRDKERSHDRDRRGRDGERNREREQSRRSRSRSERHRSDRDDGIRERSRDNELRER 143

Query: 635 DFNERRKERG 664
           +     +ERG
Sbjct: 144 EKERESRERG 153


>ref|XP_003536719.1| PREDICTED: RNA-binding protein 39-like [Glycine max]
          Length = 597

 Score = 78.2 bits (191), Expect = 3e-12
 Identities = 37/41 (90%), Positives = 40/41 (97%)
 Frame = +1

Query: 829 QRDQRTVFAYQVSLKAGERDVYEFFSRAGKVRDVQLIMDRN 951
           +RDQRTVFAYQ+SLKA ERDVYEFFSRAGKVRDV+LIMDRN
Sbjct: 219 ERDQRTVFAYQISLKADERDVYEFFSRAGKVRDVRLIMDRN 259



 Score = 59.7 bits (143), Expect = 1e-06
 Identities = 42/111 (37%), Positives = 53/111 (47%), Gaps = 6/111 (5%)
 Frame = +2

Query: 104 MDFDEYEYLENAVENPDMKKVEDKKNGGDGIVEYEEXXXXXXXXXXXXXXXXXXXXXXXX 283
           MDFDEYEYLENAVENP  K    + NGGD  V+ EE                        
Sbjct: 1   MDFDEYEYLENAVENPQAK---HRANGGDKSVKSEERGRNGSSKHKGDDDDDVDLHPK-- 55

Query: 284 LRSRKESNDHEKDR------SSRHGPSSRDREKGEKDRHASSREHRIRNRE 418
             S+   + H+++R      SSRHG  SRD   G+KDR +     R R+R+
Sbjct: 56  -HSKPGDDSHDRERLREKRGSSRHGSKSRD---GDKDRSSGGIRDRKRDRD 102


>gb|AFW89678.1| hypothetical protein ZEAMMB73_900995 [Zea mays]
          Length = 224

 Score = 77.4 bits (189), Expect = 5e-12
 Identities = 37/41 (90%), Positives = 40/41 (97%)
 Frame = +1

Query: 829 QRDQRTVFAYQVSLKAGERDVYEFFSRAGKVRDVQLIMDRN 951
           +RDQRTVFAYQ+SLKA ERDVYEFFSRAGKVRDV+LIMDRN
Sbjct: 161 ERDQRTVFAYQLSLKADERDVYEFFSRAGKVRDVRLIMDRN 201


>gb|AFW89676.1| hypothetical protein ZEAMMB73_900995 [Zea mays]
          Length = 396

 Score = 77.4 bits (189), Expect = 5e-12
 Identities = 37/41 (90%), Positives = 40/41 (97%)
 Frame = +1

Query: 829 QRDQRTVFAYQVSLKAGERDVYEFFSRAGKVRDVQLIMDRN 951
           +RDQRTVFAYQ+SLKA ERDVYEFFSRAGKVRDV+LIMDRN
Sbjct: 161 ERDQRTVFAYQLSLKADERDVYEFFSRAGKVRDVRLIMDRN 201


>gb|ACN28976.1| unknown [Zea mays] gi|413957028|gb|AFW89677.1| hypothetical protein
           ZEAMMB73_900995 [Zea mays]
          Length = 411

 Score = 77.4 bits (189), Expect = 5e-12
 Identities = 37/41 (90%), Positives = 40/41 (97%)
 Frame = +1

Query: 829 QRDQRTVFAYQVSLKAGERDVYEFFSRAGKVRDVQLIMDRN 951
           +RDQRTVFAYQ+SLKA ERDVYEFFSRAGKVRDV+LIMDRN
Sbjct: 161 ERDQRTVFAYQLSLKADERDVYEFFSRAGKVRDVRLIMDRN 201


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