BLASTX nr result

ID: Scutellaria22_contig00024390 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00024390
         (555 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAL48201.1|AF378084_1 PNCBP [Solanum tuberosum]                     64   2e-08

>gb|AAL48201.1|AF378084_1 PNCBP [Solanum tuberosum]
          Length = 1309

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 54/176 (30%), Positives = 82/176 (46%), Gaps = 11/176 (6%)
 Frame = -1

Query: 495 PMESFDSSPNSVRATSRFGAKT-QNSQGGSEYDDVISVSSSTCGSALNGSYAQKLNNNGT 319
           P++  D SPN ++ T+ + AK   NSQ G    DV S+ SS         +     ++  
Sbjct: 63  PIKMPDLSPNYMKITTSYDAKKGSNSQRGIGSVDVNSIDSS--------EFCTPKKDDKI 114

Query: 318 KYRTTNKKTLKSFGNXXXXXXXXXXXXXXSPLPMSHEDSLVD----SSHSSPHYLKATTC 151
           K R   KK +K+FG+                   +   S V+    SS  SPHY K+T C
Sbjct: 115 KNRPVMKKIMKNFGSTRSFRRRSSRSITTMKNHNTRNPSSVEFSELSSSPSPHYRKSTCC 174

Query: 150 SEIKKTRSQTSPRLAYPSHNNSLQP------LSRTSSFRSVRILVKKNSFRPRRSS 1
           S+ K      S   ++ S + S  P      LSRT+S RSV+IL+ K+SF+ ++ +
Sbjct: 175 SQGKNCLHH-SCESSFDSSDQSRSPRKYSQTLSRTTSMRSVKILINKDSFKSKKGT 229


Top