BLASTX nr result

ID: Scutellaria22_contig00024381 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00024381
         (500 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002318819.1| predicted protein [Populus trichocarpa] gi|2...   167   8e-40
gb|AAW28081.1| COP1-like protein [Solanum lycopersicum]               167   1e-39
ref|XP_002528808.1| ubiquitin ligase protein cop1, putative [Ric...   161   4e-38
ref|NP_568435.2| transducin/WD40 domain-containing protein [Arab...   160   1e-37
gb|AAK64045.1| unknown protein [Arabidopsis thaliana] gi|5025357...   160   1e-37

>ref|XP_002318819.1| predicted protein [Populus trichocarpa] gi|222859492|gb|EEE97039.1|
           predicted protein [Populus trichocarpa]
          Length = 239

 Score =  167 bits (423), Expect = 8e-40
 Identities = 76/121 (62%), Positives = 96/121 (79%), Gaps = 3/121 (2%)
 Frame = -3

Query: 498 LDVKRMVSSSVDGFLMMWDAEDQRLLRRYKGHVNSRRFVGLSVWRNGGLLSCGSENNRVF 319
           LD   +VS+S+DG L +WD+++  ++R YKGHVNSR F+GLSVWRNGGLL CGSENN+VF
Sbjct: 119 LDNVTLVSASIDGCLKLWDSDNSNVIRSYKGHVNSRSFIGLSVWRNGGLLGCGSENNKVF 178

Query: 318 VYDKRWGDPIWVRGFEP---EECDRSFVSGVCWRQKIGEERCTLVAGGSDGSLRVFEGQR 148
           VYD+RWG+PIWV    P   + C   FVS VCWRQ + E++CTLVAGGSDG L+VF+G+R
Sbjct: 179 VYDRRWGEPIWVHESNPVGRDGCGGGFVSSVCWRQ-VEEDQCTLVAGGSDGDLQVFQGRR 237

Query: 147 K 145
           K
Sbjct: 238 K 238


>gb|AAW28081.1| COP1-like protein [Solanum lycopersicum]
          Length = 120

 Score =  167 bits (422), Expect = 1e-39
 Identities = 78/118 (66%), Positives = 95/118 (80%)
 Frame = -3

Query: 498 LDVKRMVSSSVDGFLMMWDAEDQRLLRRYKGHVNSRRFVGLSVWRNGGLLSCGSENNRVF 319
           +D + ++S S+DG L MW+AEDQ++LR YKGH NSRRFVGLSVW+ GGL+ CGSENN+VF
Sbjct: 5   VDERTIISLSIDGCLKMWNAEDQKVLRTYKGHSNSRRFVGLSVWKPGGLICCGSENNQVF 64

Query: 318 VYDKRWGDPIWVRGFEPEECDRSFVSGVCWRQKIGEERCTLVAGGSDGSLRVFEGQRK 145
           VYDKRWG+PIW+ G EP   +  FVS VCW+QK  E +CTLVAG SDG LRVF G+RK
Sbjct: 65  VYDKRWGEPIWMYGREPRH-EHGFVSSVCWQQK-DENQCTLVAGDSDGVLRVFNGKRK 120


>ref|XP_002528808.1| ubiquitin ligase protein cop1, putative [Ricinus communis]
           gi|223531761|gb|EEF33581.1| ubiquitin ligase protein
           cop1, putative [Ricinus communis]
          Length = 426

 Score =  161 bits (408), Expect = 4e-38
 Identities = 74/118 (62%), Positives = 91/118 (77%)
 Frame = -3

Query: 498 LDVKRMVSSSVDGFLMMWDAEDQRLLRRYKGHVNSRRFVGLSVWRNGGLLSCGSENNRVF 319
           +D   + S+ +DG L +W+ +D +LLR YKGH+NSR FVGLSVWRNGGLL CGSENN+VF
Sbjct: 305 MDNGTLASAGIDGCLKLWNLQDSQLLRTYKGHLNSRNFVGLSVWRNGGLLGCGSENNQVF 364

Query: 318 VYDKRWGDPIWVRGFEPEECDRSFVSGVCWRQKIGEERCTLVAGGSDGSLRVFEGQRK 145
           VYDKRW +PIW  G  P   D  FV+ VCW Q +GE+RCTLV GGS+G L+VFEG+RK
Sbjct: 365 VYDKRWSEPIWAYGSGP-AADHGFVNSVCWSQ-VGEDRCTLVTGGSNGVLQVFEGKRK 420


>ref|NP_568435.2| transducin/WD40 domain-containing protein [Arabidopsis thaliana]
           gi|10176840|dbj|BAB10046.1| unnamed protein product
           [Arabidopsis thaliana] gi|332005822|gb|AED93205.1|
           transducin/WD40 domain-containing protein [Arabidopsis
           thaliana]
          Length = 368

 Score =  160 bits (405), Expect = 1e-37
 Identities = 75/122 (61%), Positives = 91/122 (74%), Gaps = 4/122 (3%)
 Frame = -3

Query: 498 LDVKRMVSSSVDGFLMMWDAEDQRLLRRYKGHVNSRRFVGLSVWRNGGLLSCGSENNRVF 319
           LD   +V++  DG L +W  ED R++R Y+GHVN+R FVGLSVWRNG L  CGSENNRVF
Sbjct: 247 LDGGTVVTAGTDGCLKLWSVEDGRVIRTYEGHVNNRNFVGLSVWRNGALFGCGSENNRVF 306

Query: 318 VYDKRWGDPIWVRGFEP----EECDRSFVSGVCWRQKIGEERCTLVAGGSDGSLRVFEGQ 151
           VYD+RWG P+WV GFEP       D+ FVS VCWRQ  G ++CTLVAGGSDG L+V+ G+
Sbjct: 307 VYDRRWGKPVWVDGFEPVGMNSGSDKRFVSSVCWRQS-GVDQCTLVAGGSDGVLQVYVGK 365

Query: 150 RK 145
           RK
Sbjct: 366 RK 367


>gb|AAK64045.1| unknown protein [Arabidopsis thaliana] gi|50253578|gb|AAT71991.1|
           At5g23730 [Arabidopsis thaliana]
          Length = 243

 Score =  160 bits (405), Expect = 1e-37
 Identities = 75/122 (61%), Positives = 91/122 (74%), Gaps = 4/122 (3%)
 Frame = -3

Query: 498 LDVKRMVSSSVDGFLMMWDAEDQRLLRRYKGHVNSRRFVGLSVWRNGGLLSCGSENNRVF 319
           LD   +V++  DG L +W  ED R++R Y+GHVN+R FVGLSVWRNG L  CGSENNRVF
Sbjct: 122 LDGGTVVTAGTDGCLKLWSVEDGRVIRTYEGHVNNRNFVGLSVWRNGALFGCGSENNRVF 181

Query: 318 VYDKRWGDPIWVRGFEP----EECDRSFVSGVCWRQKIGEERCTLVAGGSDGSLRVFEGQ 151
           VYD+RWG P+WV GFEP       D+ FVS VCWRQ  G ++CTLVAGGSDG L+V+ G+
Sbjct: 182 VYDRRWGKPVWVDGFEPVGMNSGSDKRFVSSVCWRQS-GVDQCTLVAGGSDGVLQVYVGK 240

Query: 150 RK 145
           RK
Sbjct: 241 RK 242


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