BLASTX nr result

ID: Scutellaria22_contig00024286 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00024286
         (302 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002518045.1| ubiquitin-protein ligase, putative [Ricinus ...    68   7e-10
ref|XP_003546119.1| PREDICTED: F-box/kelch-repeat protein At3g23...    67   2e-09
ref|XP_002328907.1| predicted protein [Populus trichocarpa] gi|2...    67   2e-09
gb|AFK44336.1| unknown [Lotus japonicus]                               66   3e-09
ref|NP_001241466.1| uncharacterized protein LOC100815072 [Glycin...    65   4e-09

>ref|XP_002518045.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223542641|gb|EEF44178.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 406

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 38/91 (41%), Positives = 57/91 (62%), Gaps = 2/91 (2%)
 Frame = +2

Query: 29  RTAQGRT--INHRSSRRSEMDIVQSSDQPLCLPEDIIEEILSRIPVKSLLKFRCVSKKWR 202
           R   GRT  +  +SS ++E D   S+     LPED+I EILSR+PVK LL+F+CVSK W 
Sbjct: 27  RGVAGRTQRLRTKSSAQAEPDTSIST-----LPEDLIVEILSRVPVKPLLRFKCVSKSWN 81

Query: 203 SLIGAKRFFKAHLEKSMKNPSFERHKVIART 295
           S+I   RF K  L+++ +N +   ++++  T
Sbjct: 82  SIISDPRFAKLQLKRAKENSNISCNRLLLST 112


>ref|XP_003546119.1| PREDICTED: F-box/kelch-repeat protein At3g23880-like [Glycine max]
          Length = 405

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 34/75 (45%), Positives = 48/75 (64%)
 Frame = +2

Query: 62  SSRRSEMDIVQSSDQPLCLPEDIIEEILSRIPVKSLLKFRCVSKKWRSLIGAKRFFKAHL 241
           SS + +  + +S   P  LP++++ EILSR+PVKSLL+FRCV K W SLI    F K HL
Sbjct: 32  SSVQKQQGMSESLPLPF-LPDELVVEILSRLPVKSLLQFRCVCKSWMSLIYDPYFMKKHL 90

Query: 242 EKSMKNPSFERHKVI 286
             S ++  F  H++I
Sbjct: 91  HLSSRSTHFTHHRII 105


>ref|XP_002328907.1| predicted protein [Populus trichocarpa] gi|222839337|gb|EEE77674.1|
           predicted protein [Populus trichocarpa]
          Length = 374

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 30/62 (48%), Positives = 43/62 (69%)
 Frame = +2

Query: 116 LPEDIIEEILSRIPVKSLLKFRCVSKKWRSLIGAKRFFKAHLEKSMKNPSFERHKVIART 295
           LP +II EILSR+PVK L++F+CVSK WRSLI    F K HL+++ ++ +   +K+   T
Sbjct: 8   LPSEIISEILSRLPVKCLVRFKCVSKTWRSLISHPEFVKNHLKRTKEDTNANHYKIFLST 67

Query: 296 MP 301
            P
Sbjct: 68  DP 69


>gb|AFK44336.1| unknown [Lotus japonicus]
          Length = 193

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 34/91 (37%), Positives = 56/91 (61%)
 Frame = +2

Query: 14  KILIPRTAQGRTINHRSSRRSEMDIVQSSDQPLCLPEDIIEEILSRIPVKSLLKFRCVSK 193
           ++L+P ++  +  + + S++++   V +      LP++++ EILSR+PVKSLLKFRCV K
Sbjct: 34  QLLLPPSSVQKQSHLKQSQQNQAMAVATF-----LPDELVVEILSRLPVKSLLKFRCVCK 88

Query: 194 KWRSLIGAKRFFKAHLEKSMKNPSFERHKVI 286
            W  LI    F K HL  S ++  F  H++I
Sbjct: 89  SWMLLISDPYFIKKHLHLSKQSTLFNHHRII 119


>ref|NP_001241466.1| uncharacterized protein LOC100815072 [Glycine max]
           gi|255637050|gb|ACU18857.1| unknown [Glycine max]
          Length = 406

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 30/57 (52%), Positives = 39/57 (68%)
 Frame = +2

Query: 116 LPEDIIEEILSRIPVKSLLKFRCVSKKWRSLIGAKRFFKAHLEKSMKNPSFERHKVI 286
           LP++++ EILSR+PVKSLL+FRCV K W SLI    F K HL  S +   F  H++I
Sbjct: 49  LPDELVVEILSRLPVKSLLQFRCVCKSWMSLISDPYFMKKHLHLSSRCTHFTHHRII 105


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