BLASTX nr result

ID: Scutellaria22_contig00024260 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00024260
         (321 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635646.1| PREDICTED: pentatricopeptide repeat-containi...   165   4e-39
emb|CBI23556.3| unnamed protein product [Vitis vinifera]              165   4e-39
ref|XP_003634143.1| PREDICTED: pentatricopeptide repeat-containi...   164   5e-39
ref|XP_003635637.1| PREDICTED: pentatricopeptide repeat-containi...   163   1e-38
emb|CBI41122.3| unnamed protein product [Vitis vinifera]              163   1e-38

>ref|XP_003635646.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
           chloroplastic-like, partial [Vitis vinifera]
          Length = 809

 Score =  165 bits (417), Expect = 4e-39
 Identities = 75/105 (71%), Positives = 92/105 (87%)
 Frame = -3

Query: 316 IGKQLHSWVVKHGLCLDVCVGCSLVDMYAKCAEDRSIESSRKAFDRMPEHNVMSWTAIIT 137
           +GKQLHS V++ GL LDVCVGCSLVDMYAKCA D S++ SRK F++MPEHNVMSWTAIIT
Sbjct: 249 LGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIIT 308

Query: 136 GYVQNGGCDDEAIELYCRMITEGRVKPNHFTFASLLKACGNLFNP 2
            YVQ+G CD EAIEL+C+MI+ G ++PNHF+F+S+LKACGNL +P
Sbjct: 309 AYVQSGECDKEAIELFCKMIS-GHIRPNHFSFSSVLKACGNLSDP 352



 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 46/104 (44%), Positives = 70/104 (67%), Gaps = 1/104 (0%)
 Frame = -3

Query: 319 YIGKQLHSWVVKHG-LCLDVCVGCSLVDMYAKCAEDRSIESSRKAFDRMPEHNVMSWTAI 143
           ++G+ ++ +VVK G L  DVCVGC L+DM+ K + D  + S+ K FD+MPE N+++WT +
Sbjct: 145 WVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGD--LGSAYKVFDKMPERNLVTWTLM 202

Query: 142 ITGYVQNGGCDDEAIELYCRMITEGRVKPNHFTFASLLKACGNL 11
           IT + Q  GC  +AI+L+  M   G V P+ FT++S+L AC  L
Sbjct: 203 ITRFAQL-GCARDAIDLFLDMELSGYV-PDRFTYSSVLSACTEL 244



 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 34/101 (33%), Positives = 66/101 (65%)
 Frame = -3

Query: 313 GKQLHSWVVKHGLCLDVCVGCSLVDMYAKCAEDRSIESSRKAFDRMPEHNVMSWTAIITG 134
           G+Q+H  ++K G   + C+  +L+ MY++C    +IE++ + F+ M + NV+SWT++ITG
Sbjct: 456 GEQIHGRLLKGGYKSNQCICNALISMYSRCG---NIEAAFQVFNEMEDRNVISWTSMITG 512

Query: 133 YVQNGGCDDEAIELYCRMITEGRVKPNHFTFASLLKACGNL 11
           + ++G     A+E++ +M+  G  KPN  T+ ++L AC ++
Sbjct: 513 FAKHGFA-TRALEMFHKMLETG-TKPNEITYVAVLSACSHV 551



 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 39/103 (37%), Positives = 59/103 (57%)
 Frame = -3

Query: 319 YIGKQLHSWVVKHGLCLDVCVGCSLVDMYAKCAEDRSIESSRKAFDRMPEHNVMSWTAII 140
           Y G+Q++S+ VK G+    CVG SL+ MYA+      +E +RKAFD + E N++S+ AI+
Sbjct: 353 YTGEQVYSYAVKLGIASVNCVGNSLISMYARSGR---MEDARKAFDILFEKNLVSYNAIV 409

Query: 139 TGYVQNGGCDDEAIELYCRMITEGRVKPNHFTFASLLKACGNL 11
            GY +N     E   L    I +  +  + FTFASLL    ++
Sbjct: 410 DGYAKN--LKSEEAFLLFNEIADTGIGISAFTFASLLSGAASI 450


>emb|CBI23556.3| unnamed protein product [Vitis vinifera]
          Length = 827

 Score =  165 bits (417), Expect = 4e-39
 Identities = 75/105 (71%), Positives = 92/105 (87%)
 Frame = -3

Query: 316 IGKQLHSWVVKHGLCLDVCVGCSLVDMYAKCAEDRSIESSRKAFDRMPEHNVMSWTAIIT 137
           +GKQLHS V++ GL LDVCVGCSLVDMYAKCA D S++ SRK F++MPEHNVMSWTAIIT
Sbjct: 267 LGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIIT 326

Query: 136 GYVQNGGCDDEAIELYCRMITEGRVKPNHFTFASLLKACGNLFNP 2
            YVQ+G CD EAIEL+C+MI+ G ++PNHF+F+S+LKACGNL +P
Sbjct: 327 AYVQSGECDKEAIELFCKMIS-GHIRPNHFSFSSVLKACGNLSDP 370



 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 46/104 (44%), Positives = 70/104 (67%), Gaps = 1/104 (0%)
 Frame = -3

Query: 319 YIGKQLHSWVVKHG-LCLDVCVGCSLVDMYAKCAEDRSIESSRKAFDRMPEHNVMSWTAI 143
           ++G+ ++ +VVK G L  DVCVGC L+DM+ K + D  + S+ K FD+MPE N+++WT +
Sbjct: 163 WVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGD--LGSAYKVFDKMPERNLVTWTLM 220

Query: 142 ITGYVQNGGCDDEAIELYCRMITEGRVKPNHFTFASLLKACGNL 11
           IT + Q  GC  +AI+L+  M   G V P+ FT++S+L AC  L
Sbjct: 221 ITRFAQL-GCARDAIDLFLDMELSGYV-PDRFTYSSVLSACTEL 262



 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 34/101 (33%), Positives = 66/101 (65%)
 Frame = -3

Query: 313 GKQLHSWVVKHGLCLDVCVGCSLVDMYAKCAEDRSIESSRKAFDRMPEHNVMSWTAIITG 134
           G+Q+H  ++K G   + C+  +L+ MY++C    +IE++ + F+ M + NV+SWT++ITG
Sbjct: 474 GEQIHGRLLKGGYKSNQCICNALISMYSRCG---NIEAAFQVFNEMEDRNVISWTSMITG 530

Query: 133 YVQNGGCDDEAIELYCRMITEGRVKPNHFTFASLLKACGNL 11
           + ++G     A+E++ +M+  G  KPN  T+ ++L AC ++
Sbjct: 531 FAKHGFA-TRALEMFHKMLETG-TKPNEITYVAVLSACSHV 569



 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 39/103 (37%), Positives = 59/103 (57%)
 Frame = -3

Query: 319 YIGKQLHSWVVKHGLCLDVCVGCSLVDMYAKCAEDRSIESSRKAFDRMPEHNVMSWTAII 140
           Y G+Q++S+ VK G+    CVG SL+ MYA+      +E +RKAFD + E N++S+ AI+
Sbjct: 371 YTGEQVYSYAVKLGIASVNCVGNSLISMYARSGR---MEDARKAFDILFEKNLVSYNAIV 427

Query: 139 TGYVQNGGCDDEAIELYCRMITEGRVKPNHFTFASLLKACGNL 11
            GY +N     E   L    I +  +  + FTFASLL    ++
Sbjct: 428 DGYAKN--LKSEEAFLLFNEIADTGIGISAFTFASLLSGAASI 468


>ref|XP_003634143.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
           chloroplastic-like [Vitis vinifera]
          Length = 631

 Score =  164 bits (416), Expect = 5e-39
 Identities = 76/105 (72%), Positives = 91/105 (86%)
 Frame = -3

Query: 316 IGKQLHSWVVKHGLCLDVCVGCSLVDMYAKCAEDRSIESSRKAFDRMPEHNVMSWTAIIT 137
           +GKQLHS V++ GL LDVCVGCSLVDMYAKCA D S++ SRK F+RMPEHNVMSWTAIIT
Sbjct: 298 LGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFERMPEHNVMSWTAIIT 357

Query: 136 GYVQNGGCDDEAIELYCRMITEGRVKPNHFTFASLLKACGNLFNP 2
            YVQ+G CD EAIEL+C+MI+ G + PNHF+F+S+LKACGNL +P
Sbjct: 358 AYVQSGECDKEAIELFCKMIS-GHIWPNHFSFSSVLKACGNLSDP 401



 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 46/104 (44%), Positives = 70/104 (67%), Gaps = 1/104 (0%)
 Frame = -3

Query: 319 YIGKQLHSWVVKHG-LCLDVCVGCSLVDMYAKCAEDRSIESSRKAFDRMPEHNVMSWTAI 143
           ++G+ ++ +VVK G L  DVCVGC L+DM+ K + D  + S+ K FD+MPE N+++WT +
Sbjct: 194 WVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGD--LGSAYKVFDKMPERNLVTWTLM 251

Query: 142 ITGYVQNGGCDDEAIELYCRMITEGRVKPNHFTFASLLKACGNL 11
           IT + Q  GC  +AI+L+  M   G V P+ FT++S+L AC  L
Sbjct: 252 ITRFAQL-GCARDAIDLFLDMELSGYV-PDRFTYSSVLSACTEL 293



 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 39/97 (40%), Positives = 57/97 (58%)
 Frame = -3

Query: 319 YIGKQLHSWVVKHGLCLDVCVGCSLVDMYAKCAEDRSIESSRKAFDRMPEHNVMSWTAII 140
           Y G+Q++S+ VK G+    CVG SL+ MYA+      +E +RKAFD + E N++S+ AI+
Sbjct: 402 YTGEQVYSYAVKLGIASVNCVGNSLISMYARSGR---MEDARKAFDILFEKNLVSYNAIV 458

Query: 139 TGYVQNGGCDDEAIELYCRMITEGRVKPNHFTFASLL 29
            GY +N     E   L    I +  +  + FTFASLL
Sbjct: 459 DGYAKN--LKSEEAFLLFNEIADTGIGISAFTFASLL 493


>ref|XP_003635637.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
           chloroplastic-like, partial [Vitis vinifera]
          Length = 629

 Score =  163 bits (413), Expect = 1e-38
 Identities = 74/105 (70%), Positives = 91/105 (86%)
 Frame = -3

Query: 316 IGKQLHSWVVKHGLCLDVCVGCSLVDMYAKCAEDRSIESSRKAFDRMPEHNVMSWTAIIT 137
           +GKQLHS V++ GL LDVCVGCSLVDMYAKCA D S++ SRK F++MPEHNVMSWTAIIT
Sbjct: 69  LGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIIT 128

Query: 136 GYVQNGGCDDEAIELYCRMITEGRVKPNHFTFASLLKACGNLFNP 2
            Y Q+G CD EAIEL+C+MI+ G ++PNHF+F+S+LKACGNL +P
Sbjct: 129 AYAQSGECDKEAIELFCKMIS-GHIRPNHFSFSSVLKACGNLSDP 172



 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 34/101 (33%), Positives = 66/101 (65%)
 Frame = -3

Query: 313 GKQLHSWVVKHGLCLDVCVGCSLVDMYAKCAEDRSIESSRKAFDRMPEHNVMSWTAIITG 134
           G+Q+H  ++K G   + C+  +L+ MY++C    +IE++ + F+ M + NV+SWT++ITG
Sbjct: 276 GEQIHGRLLKGGYKSNQCICNALISMYSRCG---NIEAAFQVFNEMEDRNVISWTSMITG 332

Query: 133 YVQNGGCDDEAIELYCRMITEGRVKPNHFTFASLLKACGNL 11
           + ++G     A+E++ +M+  G  KPN  T+ ++L AC ++
Sbjct: 333 FAKHGFA-TRALEMFHKMLETG-TKPNEITYVAVLSACSHV 371



 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 39/103 (37%), Positives = 59/103 (57%)
 Frame = -3

Query: 319 YIGKQLHSWVVKHGLCLDVCVGCSLVDMYAKCAEDRSIESSRKAFDRMPEHNVMSWTAII 140
           Y G+Q++S+ VK G+    CVG SL+ MYA+      +E +RKAFD + E N++S+ AI+
Sbjct: 173 YTGEQVYSYAVKLGIASVNCVGNSLISMYARSGR---MEDARKAFDILFEKNLVSYNAIV 229

Query: 139 TGYVQNGGCDDEAIELYCRMITEGRVKPNHFTFASLLKACGNL 11
            GY +N     E   L    I +  +  + FTFASLL    ++
Sbjct: 230 DGYAKN--LKSEEAFLLFNEIADTGIGISAFTFASLLSGAASI 270



 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 28/61 (45%), Positives = 41/61 (67%)
 Frame = -3

Query: 193 KAFDRMPEHNVMSWTAIITGYVQNGGCDDEAIELYCRMITEGRVKPNHFTFASLLKACGN 14
           K FD+MPE N+++WT +IT + Q  GC  +AI+L+  M   G V P+ FT++S+L AC  
Sbjct: 6   KVFDKMPERNLVTWTLMITRFAQL-GCARDAIDLFLDMELSGYV-PDRFTYSSVLSACTE 63

Query: 13  L 11
           L
Sbjct: 64  L 64


>emb|CBI41122.3| unnamed protein product [Vitis vinifera]
          Length = 634

 Score =  163 bits (413), Expect = 1e-38
 Identities = 74/105 (70%), Positives = 91/105 (86%)
 Frame = -3

Query: 316 IGKQLHSWVVKHGLCLDVCVGCSLVDMYAKCAEDRSIESSRKAFDRMPEHNVMSWTAIIT 137
           +GKQLHS V++ GL LDVCVGCSLVDMYAKCA D S++ SRK F++MPEHNVMSWTAIIT
Sbjct: 74  LGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIIT 133

Query: 136 GYVQNGGCDDEAIELYCRMITEGRVKPNHFTFASLLKACGNLFNP 2
            Y Q+G CD EAIEL+C+MI+ G ++PNHF+F+S+LKACGNL +P
Sbjct: 134 AYAQSGECDKEAIELFCKMIS-GHIRPNHFSFSSVLKACGNLSDP 177



 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 34/101 (33%), Positives = 66/101 (65%)
 Frame = -3

Query: 313 GKQLHSWVVKHGLCLDVCVGCSLVDMYAKCAEDRSIESSRKAFDRMPEHNVMSWTAIITG 134
           G+Q+H  ++K G   + C+  +L+ MY++C    +IE++ + F+ M + NV+SWT++ITG
Sbjct: 281 GEQIHGRLLKGGYKSNQCICNALISMYSRCG---NIEAAFQVFNEMEDRNVISWTSMITG 337

Query: 133 YVQNGGCDDEAIELYCRMITEGRVKPNHFTFASLLKACGNL 11
           + ++G     A+E++ +M+  G  KPN  T+ ++L AC ++
Sbjct: 338 FAKHGFA-TRALEMFHKMLETG-TKPNEITYVAVLSACSHV 376



 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 39/103 (37%), Positives = 59/103 (57%)
 Frame = -3

Query: 319 YIGKQLHSWVVKHGLCLDVCVGCSLVDMYAKCAEDRSIESSRKAFDRMPEHNVMSWTAII 140
           Y G+Q++S+ VK G+    CVG SL+ MYA+      +E +RKAFD + E N++S+ AI+
Sbjct: 178 YTGEQVYSYAVKLGIASVNCVGNSLISMYARSGR---MEDARKAFDILFEKNLVSYNAIV 234

Query: 139 TGYVQNGGCDDEAIELYCRMITEGRVKPNHFTFASLLKACGNL 11
            GY +N     E   L    I +  +  + FTFASLL    ++
Sbjct: 235 DGYAKN--LKSEEAFLLFNEIADTGIGISAFTFASLLSGAASI 275



 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 28/61 (45%), Positives = 41/61 (67%)
 Frame = -3

Query: 193 KAFDRMPEHNVMSWTAIITGYVQNGGCDDEAIELYCRMITEGRVKPNHFTFASLLKACGN 14
           K FD+MPE N+++WT +IT + Q  GC  +AI+L+  M   G V P+ FT++S+L AC  
Sbjct: 11  KVFDKMPERNLVTWTLMITRFAQL-GCARDAIDLFLDMELSGYV-PDRFTYSSVLSACTE 68

Query: 13  L 11
           L
Sbjct: 69  L 69


Top