BLASTX nr result

ID: Scutellaria22_contig00024246 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00024246
         (792 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267987.2| PREDICTED: RNA polymerase II C-terminal doma...   145   7e-33
emb|CBI35690.3| unnamed protein product [Vitis vinifera]              145   7e-33
emb|CAN72816.1| hypothetical protein VITISV_004100 [Vitis vinifera]   145   7e-33
ref|XP_004134718.1| PREDICTED: RNA polymerase II C-terminal doma...   136   5e-30
ref|XP_002329761.1| predicted protein [Populus trichocarpa] gi|2...   134   2e-29

>ref|XP_002267987.2| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like 1
           [Vitis vinifera]
          Length = 860

 Score =  145 bits (367), Expect = 7e-33
 Identities = 70/123 (56%), Positives = 95/123 (77%), Gaps = 1/123 (0%)
 Frame = -3

Query: 367 MYRKLVVVYEGERLLGGAELQQQDGVVLGEEVKDIRISHYSPPSERCPPLAVLHTVNSAG 188
           MY+   +VYEG+ ++G  E+  Q+  +  E +K+IRISHYS PSERCPPLAVLHT+ S G
Sbjct: 1   MYKS--IVYEGDDVVGEVEIYPQNQGL--ELMKEIRISHYSQPSERCPPLAVLHTITSCG 56

Query: 187 ICFKLEST-AKNPDSPLSLMHATCLRDNKAVVALVGGREFHLVAMHSRKYEGQNPCFWGF 11
           +CFK+ES+ A++ D+PL L+H+TC+R+NK  V  +G  E HLVAM+S+K +GQ PCFWGF
Sbjct: 57  VCFKMESSKAQSQDTPLYLLHSTCIRENKTAVMSLGEEELHLVAMYSKKKDGQYPCFWGF 116

Query: 10  NVA 2
           NVA
Sbjct: 117 NVA 119


>emb|CBI35690.3| unnamed protein product [Vitis vinifera]
          Length = 788

 Score =  145 bits (367), Expect = 7e-33
 Identities = 70/123 (56%), Positives = 95/123 (77%), Gaps = 1/123 (0%)
 Frame = -3

Query: 367 MYRKLVVVYEGERLLGGAELQQQDGVVLGEEVKDIRISHYSPPSERCPPLAVLHTVNSAG 188
           MY+   +VYEG+ ++G  E+  Q+  +  E +K+IRISHYS PSERCPPLAVLHT+ S G
Sbjct: 1   MYKS--IVYEGDDVVGEVEIYPQNQGL--ELMKEIRISHYSQPSERCPPLAVLHTITSCG 56

Query: 187 ICFKLEST-AKNPDSPLSLMHATCLRDNKAVVALVGGREFHLVAMHSRKYEGQNPCFWGF 11
           +CFK+ES+ A++ D+PL L+H+TC+R+NK  V  +G  E HLVAM+S+K +GQ PCFWGF
Sbjct: 57  VCFKMESSKAQSQDTPLYLLHSTCIRENKTAVMSLGEEELHLVAMYSKKKDGQYPCFWGF 116

Query: 10  NVA 2
           NVA
Sbjct: 117 NVA 119


>emb|CAN72816.1| hypothetical protein VITISV_004100 [Vitis vinifera]
          Length = 894

 Score =  145 bits (367), Expect = 7e-33
 Identities = 70/123 (56%), Positives = 95/123 (77%), Gaps = 1/123 (0%)
 Frame = -3

Query: 367 MYRKLVVVYEGERLLGGAELQQQDGVVLGEEVKDIRISHYSPPSERCPPLAVLHTVNSAG 188
           MY+   +VYEG+ ++G  E+  Q+  +  E +K+IRISHYS PSERCPPLAVLHT+ S G
Sbjct: 1   MYKS--IVYEGDDVVGEVEIYPQNQGL--ELMKEIRISHYSQPSERCPPLAVLHTITSCG 56

Query: 187 ICFKLEST-AKNPDSPLSLMHATCLRDNKAVVALVGGREFHLVAMHSRKYEGQNPCFWGF 11
           +CFK+ES+ A++ D+PL L+H+TC+R+NK  V  +G  E HLVAM+S+K +GQ PCFWGF
Sbjct: 57  VCFKMESSKAQSQDTPLYLLHSTCIRENKTAVMSLGEEELHLVAMYSKKKDGQYPCFWGF 116

Query: 10  NVA 2
           NVA
Sbjct: 117 NVA 119


>ref|XP_004134718.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
           1-like [Cucumis sativus]
           gi|449479317|ref|XP_004155567.1| PREDICTED: LOW QUALITY
           PROTEIN: RNA polymerase II C-terminal domain
           phosphatase-like 1-like [Cucumis sativus]
          Length = 803

 Score =  136 bits (343), Expect = 5e-30
 Identities = 66/124 (53%), Positives = 91/124 (73%), Gaps = 2/124 (1%)
 Frame = -3

Query: 367 MYRKLVVVYEGERLLGGAELQQQD-GVVLGEEVKDIRISHYSPPSERCPPLAVLHTVNSA 191
           MY+   VVY G+ LLG  E+  ++       EVK+IRI+H+S PSERCPPLAVLHT+ ++
Sbjct: 1   MYKS--VVYHGDELLGDVEIYPEEKNGYKNIEVKEIRITHFSQPSERCPPLAVLHTIAAS 58

Query: 190 GICFKLES-TAKNPDSPLSLMHATCLRDNKAVVALVGGREFHLVAMHSRKYEGQNPCFWG 14
           GICFK+ES T+++ D+PL+L+H++C+ +NK  + + G  E HLVAM SR  + Q PCFWG
Sbjct: 59  GICFKMESKTSQSQDTPLNLLHSSCIMENKTAIMMFGVEELHLVAMFSRDLDKQYPCFWG 118

Query: 13  FNVA 2
           FNVA
Sbjct: 119 FNVA 122


>ref|XP_002329761.1| predicted protein [Populus trichocarpa] gi|222870823|gb|EEF07954.1|
           predicted protein [Populus trichocarpa]
          Length = 473

 Score =  134 bits (337), Expect = 2e-29
 Identities = 73/136 (53%), Positives = 92/136 (67%), Gaps = 20/136 (14%)
 Frame = -3

Query: 349 VVYEGERLLGGAEL----QQQDGV--------VLGEEVKDIRISHYSPPSERCPPLAVLH 206
           VVY+GE LLG  E+    QQQ+          V+ E VK IRISH+S  SERCPPLAVLH
Sbjct: 4   VVYKGEELLGEVEIYAQEQQQEEEENKNKRKRVIDEIVKGIRISHFSQASERCPPLAVLH 63

Query: 205 TVNSAGICFKLE-STAKNP-------DSPLSLMHATCLRDNKAVVALVGGREFHLVAMHS 50
           T+ S G+CFK+E STA +        +SPL L+H++C+++NK  V L+GG E HLVAM S
Sbjct: 64  TITSIGVCFKMEESTASSSTKISSQQESPLRLLHSSCIQENKTAVMLLGGEELHLVAMPS 123

Query: 49  RKYEGQNPCFWGFNVA 2
           R  E ++PCFWGFNVA
Sbjct: 124 RSNERKHPCFWGFNVA 139


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