BLASTX nr result
ID: Scutellaria22_contig00024220
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Scutellaria22_contig00024220
(909 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002885498.1| ATRPABC24.3 [Arabidopsis lyrata subsp. lyrat... 315 9e-84
ref|NP_188871.1| DNA-directed RNA polymerase II subunit E [Arabi... 312 6e-83
ref|XP_002331171.1| predicted protein [Populus trichocarpa] gi|2... 311 1e-82
ref|NP_001238044.1| uncharacterized protein LOC100499667 [Glycin... 310 2e-82
ref|NP_001237497.1| uncharacterized protein LOC100306098 [Glycin... 309 5e-82
>ref|XP_002885498.1| ATRPABC24.3 [Arabidopsis lyrata subsp. lyrata]
gi|297331338|gb|EFH61757.1| ATRPABC24.3 [Arabidopsis
lyrata subsp. lyrata]
Length = 205
Score = 315 bits (807), Expect = 9e-84
Identities = 155/205 (75%), Positives = 180/205 (87%), Gaps = 1/205 (0%)
Frame = +1
Query: 73 VMSEEEIGRLYRIRKTVLQMLKDRGYLVHDSEIEMSKMLFIQKYGENMKREDLFIIKESR 252
+++EEEI RLYRI+KT++QMLKDRGY + DSE+ M+K FI+K+G+NMKREDL +K R
Sbjct: 1 MLTEEEIKRLYRIQKTLMQMLKDRGYFIADSELTMTKQQFIRKHGDNMKREDLVTLKVKR 60
Query: 253 NEN-DQIYVFFPDEAKVGVKTIKTYTNRMKEENVHRAILVVQQNLTPFAKTCISEISSKF 429
N+N DQ+Y+FFPDEAKVGVKT+K YTNRMK ENV+RAILVVQQNLTPFA+TCISEISSKF
Sbjct: 61 NDNSDQLYIFFPDEAKVGVKTMKMYTNRMKSENVYRAILVVQQNLTPFARTCISEISSKF 120
Query: 430 HLDVFQEAELLVNIKDHVLVPEHQXXXXXXXXXXXXRYTVRETQLPRIQITDPIARYYGL 609
HL+VFQEAE+LVNIK+HVLVPEHQ RYTV+ETQLPRIQ+TDPIARY+GL
Sbjct: 121 HLEVFQEAEMLVNIKEHVLVPEHQVLTTEEKKTLLERYTVKETQLPRIQVTDPIARYFGL 180
Query: 610 KRGQVVKIIRPSETAGRYVTYRYVV 684
KRGQVVKIIRPSETAGRYVTYRYVV
Sbjct: 181 KRGQVVKIIRPSETAGRYVTYRYVV 205
>ref|NP_188871.1| DNA-directed RNA polymerase II subunit E [Arabidopsis thaliana]
gi|13899113|gb|AAK48978.1|AF370551_1 RNA polymerase I,
II and III 24.3 kDa subunit [Arabidopsis thaliana]
gi|15724322|gb|AAL06554.1|AF412101_1 AT3g22320/MCB17_5
[Arabidopsis thaliana] gi|3372233|gb|AAC28253.1| RNA
polymerase I, II and III 24.3 kDa subunit [Arabidopsis
thaliana] gi|9293866|dbj|BAB01769.1| RNA polymerase I,
II and III 24.3 kDa subunit [Arabidopsis thaliana]
gi|21554280|gb|AAM63355.1| RNA polymerase I, II and III
24.3 kDa subunit [Arabidopsis thaliana]
gi|25083949|gb|AAN72141.1| RNA polymerase I, II and III
24.3 kDa subunit [Arabidopsis thaliana]
gi|332643100|gb|AEE76621.1| DNA-directed RNA polymerase
II subunit E [Arabidopsis thaliana]
Length = 205
Score = 312 bits (800), Expect = 6e-83
Identities = 153/205 (74%), Positives = 179/205 (87%), Gaps = 1/205 (0%)
Frame = +1
Query: 73 VMSEEEIGRLYRIRKTVLQMLKDRGYLVHDSEIEMSKMLFIQKYGENMKREDLFIIKESR 252
+++EEE+ RLYRI+KT++QML+DRGY + DSE+ M+K FI+K+G+NMKREDL +K R
Sbjct: 1 MLTEEELKRLYRIQKTLMQMLRDRGYFIADSELTMTKQQFIRKHGDNMKREDLVTLKAKR 60
Query: 253 NEN-DQIYVFFPDEAKVGVKTIKTYTNRMKEENVHRAILVVQQNLTPFAKTCISEISSKF 429
N+N DQ+Y+FFPDEAKVGVKT+K YTNRMK ENV RAILVVQQNLTPFA+TCISEISSKF
Sbjct: 61 NDNSDQLYIFFPDEAKVGVKTMKMYTNRMKSENVFRAILVVQQNLTPFARTCISEISSKF 120
Query: 430 HLDVFQEAELLVNIKDHVLVPEHQXXXXXXXXXXXXRYTVRETQLPRIQITDPIARYYGL 609
HL+VFQEAE+LVNIK+HVLVPEHQ RYTV+ETQLPRIQ+TDPIARY+GL
Sbjct: 121 HLEVFQEAEMLVNIKEHVLVPEHQVLTTEEKKTLLERYTVKETQLPRIQVTDPIARYFGL 180
Query: 610 KRGQVVKIIRPSETAGRYVTYRYVV 684
KRGQVVKIIRPSETAGRYVTYRYVV
Sbjct: 181 KRGQVVKIIRPSETAGRYVTYRYVV 205
>ref|XP_002331171.1| predicted protein [Populus trichocarpa] gi|222873254|gb|EEF10385.1|
predicted protein [Populus trichocarpa]
Length = 206
Score = 311 bits (797), Expect = 1e-82
Identities = 159/206 (77%), Positives = 176/206 (85%), Gaps = 1/206 (0%)
Frame = +1
Query: 70 MVMSEEEIGRLYRIRKTVLQMLKDRGYLVHDSEIEMSKMLFIQKYGENMKREDLFIIKES 249
M ++EEEI RL RIRKTV+QMLKDRGY V D EI+M++ F KYG NMKREDL I K
Sbjct: 1 MTLTEEEIKRLLRIRKTVMQMLKDRGYFVGDFEIKMTREQFESKYGNNMKREDLVINKTK 60
Query: 250 RNEN-DQIYVFFPDEAKVGVKTIKTYTNRMKEENVHRAILVVQQNLTPFAKTCISEISSK 426
RN++ DQIYVFFP+EAKVGVKT+KTYTNRMK ENV RAILVVQQNLTPFA+TCI+EIS+K
Sbjct: 61 RNDSSDQIYVFFPEEAKVGVKTMKTYTNRMKSENVFRAILVVQQNLTPFARTCINEISTK 120
Query: 427 FHLDVFQEAELLVNIKDHVLVPEHQXXXXXXXXXXXXRYTVRETQLPRIQITDPIARYYG 606
FHL+VFQEAELLVNIK+HVLVPEHQ RYTV+ETQLPRIQITDPIARYYG
Sbjct: 121 FHLEVFQEAELLVNIKEHVLVPEHQVLSNEEKKTLLERYTVKETQLPRIQITDPIARYYG 180
Query: 607 LKRGQVVKIIRPSETAGRYVTYRYVV 684
LKRGQVVKIIRPSETAGRYVTYRYV+
Sbjct: 181 LKRGQVVKIIRPSETAGRYVTYRYVI 206
>ref|NP_001238044.1| uncharacterized protein LOC100499667 [Glycine max]
gi|255625665|gb|ACU13177.1| unknown [Glycine max]
Length = 206
Score = 310 bits (795), Expect = 2e-82
Identities = 158/206 (76%), Positives = 174/206 (84%), Gaps = 1/206 (0%)
Frame = +1
Query: 70 MVMSEEEIGRLYRIRKTVLQMLKDRGYLVHDSEIEMSKMLFIQKYGENMKREDLFIIKES 249
MV+SEEE+GRLYRIRKTV+QML+DRG+LV D EI MSK F KYGE+MKREDL I K
Sbjct: 1 MVLSEEEMGRLYRIRKTVMQMLRDRGFLVGDFEINMSKHEFKSKYGEHMKREDLVINKSK 60
Query: 250 R-NENDQIYVFFPDEAKVGVKTIKTYTNRMKEENVHRAILVVQQNLTPFAKTCISEISSK 426
+ N DQIYVFFPDE KVGVKT+KTYTNRM ENV+RAILV Q NLTPFA+TCISEISSK
Sbjct: 61 KDNSGDQIYVFFPDEPKVGVKTMKTYTNRMNSENVYRAILVTQTNLTPFARTCISEISSK 120
Query: 427 FHLDVFQEAELLVNIKDHVLVPEHQXXXXXXXXXXXXRYTVRETQLPRIQITDPIARYYG 606
FHL+VFQEAELLVNIK+H LVPEHQ RYTV+ETQLPRIQ+TDP+ARYYG
Sbjct: 121 FHLEVFQEAELLVNIKEHELVPEHQVLTDAEKKTLLERYTVKETQLPRIQVTDPVARYYG 180
Query: 607 LKRGQVVKIIRPSETAGRYVTYRYVV 684
LKRGQVVKIIRPSETAGRYVTYR+VV
Sbjct: 181 LKRGQVVKIIRPSETAGRYVTYRFVV 206
>ref|NP_001237497.1| uncharacterized protein LOC100306098 [Glycine max]
gi|255627545|gb|ACU14117.1| unknown [Glycine max]
Length = 206
Score = 309 bits (792), Expect = 5e-82
Identities = 158/206 (76%), Positives = 173/206 (83%), Gaps = 1/206 (0%)
Frame = +1
Query: 70 MVMSEEEIGRLYRIRKTVLQMLKDRGYLVHDSEIEMSKMLFIQKYGENMKREDLFIIKES 249
MV+SEEEIGRLYRIRKTV+QML+DR +LV D EI MSK F KYGE+MKREDL I K
Sbjct: 1 MVLSEEEIGRLYRIRKTVMQMLRDRNFLVGDFEINMSKHEFKSKYGEHMKREDLVINKSK 60
Query: 250 R-NENDQIYVFFPDEAKVGVKTIKTYTNRMKEENVHRAILVVQQNLTPFAKTCISEISSK 426
+ N DQIYVFFPDE KVGVKT+KTYTNRM ENV+RAILV Q NLTPFA+TCISEISSK
Sbjct: 61 KDNSGDQIYVFFPDEPKVGVKTMKTYTNRMNSENVYRAILVTQTNLTPFARTCISEISSK 120
Query: 427 FHLDVFQEAELLVNIKDHVLVPEHQXXXXXXXXXXXXRYTVRETQLPRIQITDPIARYYG 606
FHL+VFQEAELLVNIK+H LVPEHQ RYTV+ETQLPRIQ+TDP+ARYYG
Sbjct: 121 FHLEVFQEAELLVNIKEHELVPEHQVLTDAEKKTLLERYTVKETQLPRIQVTDPVARYYG 180
Query: 607 LKRGQVVKIIRPSETAGRYVTYRYVV 684
LKRGQVVKIIRPSETAGRYVTYR+VV
Sbjct: 181 LKRGQVVKIIRPSETAGRYVTYRFVV 206