BLASTX nr result

ID: Scutellaria22_contig00024138 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00024138
         (306 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAJ53111.1| JHL07K02.1 [Jatropha curcas]                           91   1e-16
ref|XP_002281032.2| PREDICTED: LOW QUALITY PROTEIN: pentatricope...    89   4e-16
ref|XP_002511070.1| pentatricopeptide repeat-containing protein,...    83   2e-14
ref|XP_003532384.1| PREDICTED: pentatricopeptide repeat-containi...    77   1e-12
ref|XP_002318186.1| predicted protein [Populus trichocarpa] gi|2...    77   1e-12

>dbj|BAJ53111.1| JHL07K02.1 [Jatropha curcas]
          Length = 248

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 53/104 (50%), Positives = 63/104 (60%), Gaps = 3/104 (2%)
 Frame = +2

Query: 2   IHQVHAQAIARGLSSL--LLPHILHACTFSLSKT-TGVSFTSGIAYSSKIFDLILYPSAF 172
           +HQ+HA AI  G  SL      IL    +SL+ T T  S TS + Y+  +F  I  PS F
Sbjct: 27  LHQLHANAITNGFLSLNSSSQKILTKILYSLNATATSKSSTSLLQYAVSVFSAITNPSPF 86

Query: 173 DYNAVIRAHTLLRSPHTALNFFAQMRRKSVSPDFRTFPLVLKAC 304
            YN VIRAHTL  SP +AL FF QMRR S+ PDF +FP V KAC
Sbjct: 87  CYNLVIRAHTLHSSPLSALRFFLQMRRFSIPPDFHSFPFVFKAC 130


>ref|XP_002281032.2| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g61800 [Vitis vinifera]
          Length = 576

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 57/110 (51%), Positives = 66/110 (60%), Gaps = 9/110 (8%)
 Frame = +2

Query: 2   IHQVHAQAIARGL------SSLLLPHILHACTFSLSKTTGVSFTSGIA---YSSKIFDLI 154
           +HQVHA  I  GL      SSLLL +IL A T +L  TT  S T+  A   Y+  +F+ I
Sbjct: 31  LHQVHAHTITTGLLWGLHHSSLLLTNILTAFT-ALLPTTNASPTTPAALTGYALSVFNRI 89

Query: 155 LYPSAFDYNAVIRAHTLLRSPHTALNFFAQMRRKSVSPDFRTFPLVLKAC 304
             PS F YN +IRAHTLL SP  AL  F +MRR SV PD  TFP  LKAC
Sbjct: 90  PNPSTFGYNTMIRAHTLLSSPLAALVIFVRMRRLSVPPDTHTFPFCLKAC 139


>ref|XP_002511070.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223550185|gb|EEF51672.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 551

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 50/105 (47%), Positives = 63/105 (60%), Gaps = 4/105 (3%)
 Frame = +2

Query: 2   IHQVHAQAIARGLSSLLL---PHILHACTFSLSKT-TGVSFTSGIAYSSKIFDLILYPSA 169
           ++QVHAQA  +GL SL     P IL    ++L+   T  S  S + Y+   FD I  PS 
Sbjct: 43  LYQVHAQAFTKGLLSLTACSSPQILTKILYALTTIPTPKSSFSLLHYAVSTFDNIQNPST 102

Query: 170 FDYNAVIRAHTLLRSPHTALNFFAQMRRKSVSPDFRTFPLVLKAC 304
           F YN +IR HTL  S  +AL+FF QMRR SV PDF ++P  LKAC
Sbjct: 103 FCYNVIIRLHTLHSSALSALHFFLQMRRFSVPPDFHSYPFALKAC 147


>ref|XP_003532384.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g61800-like [Glycine max]
          Length = 577

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 48/103 (46%), Positives = 61/103 (59%), Gaps = 3/103 (2%)
 Frame = +2

Query: 2   IHQVHAQAIARGLSSLLLPHILHACTFSLSK--TTGVSFTSGIA-YSSKIFDLILYPSAF 172
           +HQVHA +I  GL  L    IL+    +LS   TT  +  S I  Y+  +F  I  PS F
Sbjct: 16  LHQVHAHSITTGLLPLHTFPILNNILSTLSSLLTTSSNSNSIITFYALSLFHSIPNPSTF 75

Query: 173 DYNAVIRAHTLLRSPHTALNFFAQMRRKSVSPDFRTFPLVLKA 301
            +N +IR HTLL SP  AL+ F+ +RR S+ PDF TFP VLKA
Sbjct: 76  SFNTLIRIHTLLLSPLPALHLFSTLRRLSLPPDFHTFPFVLKA 118


>ref|XP_002318186.1| predicted protein [Populus trichocarpa] gi|222858859|gb|EEE96406.1|
           predicted protein [Populus trichocarpa]
          Length = 537

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 47/103 (45%), Positives = 59/103 (57%), Gaps = 2/103 (1%)
 Frame = +2

Query: 2   IHQVHAQAIARG-LSSLLLPHILHACTFSLS-KTTGVSFTSGIAYSSKIFDLILYPSAFD 175
           +HQ+HA  I    LS    P +L    ++L+ K    S TS + Y+  IF+ I  PS F 
Sbjct: 32  LHQLHAYTITNTPLSFHSSPSLLTKFLYTLTTKAKSKSSTSLLHYAKSIFNSIQNPSTFC 91

Query: 176 YNAVIRAHTLLRSPHTALNFFAQMRRKSVSPDFRTFPLVLKAC 304
           YN +IR HTLL  P  AL+FF QMRR SV  D  +FP  LKAC
Sbjct: 92  YNTIIRVHTLLSFPIPALHFFTQMRRLSVPLDSHSFPFTLKAC 134


Top