BLASTX nr result

ID: Scutellaria22_contig00023975 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00023975
         (412 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003544621.1| PREDICTED: 50S ribosomal protein L33-like [G...    45   3e-06
gb|ADR71262.1| 50S ribosomal protein L33A [Hevea brasiliensis]         47   4e-06
ref|XP_004135554.1| PREDICTED: 50S ribosomal protein L33-like [C...    45   7e-06

>ref|XP_003544621.1| PREDICTED: 50S ribosomal protein L33-like [Glycine max]
           gi|356563842|ref|XP_003550167.1| PREDICTED: 50S
           ribosomal protein L33-like [Glycine max]
           gi|255646477|gb|ACU23717.1| unknown [Glycine max]
          Length = 57

 Score = 45.1 bits (105), Expect(2) = 3e-06
 Identities = 20/25 (80%), Positives = 21/25 (84%)
 Frame = -1

Query: 241 TAKLEIRKYDPRVKRHVVFTEEKMK 167
           T KLE RKYDPRV RHV+FTE KMK
Sbjct: 33  TEKLEFRKYDPRVNRHVLFTEAKMK 57



 Score = 31.2 bits (69), Expect(2) = 3e-06
 Identities = 13/20 (65%), Positives = 17/20 (85%)
 Frame = -2

Query: 312 DKKKERRKLIKLVSSAGTGF 253
           DKKK+ +  +KLVS+AGTGF
Sbjct: 3   DKKKKAQMFVKLVSAAGTGF 22


>gb|ADR71262.1| 50S ribosomal protein L33A [Hevea brasiliensis]
          Length = 62

 Score = 46.6 bits (109), Expect(2) = 4e-06
 Identities = 21/28 (75%), Positives = 23/28 (82%)
 Frame = -1

Query: 250 KRNTAKLEIRKYDPRVKRHVVFTEEKMK 167
           K+ T KLE RKYDPRV RHV+FTE KMK
Sbjct: 35  KKITEKLEFRKYDPRVNRHVLFTEAKMK 62



 Score = 28.9 bits (63), Expect(2) = 4e-06
 Identities = 13/20 (65%), Positives = 16/20 (80%)
 Frame = -2

Query: 312 DKKKERRKLIKLVSSAGTGF 253
           DKKK+    I+LVS+AGTGF
Sbjct: 7   DKKKKTFMFIRLVSAAGTGF 26


>ref|XP_004135554.1| PREDICTED: 50S ribosomal protein L33-like [Cucumis sativus]
           gi|449488522|ref|XP_004158068.1| PREDICTED: 50S
           ribosomal protein L33-like [Cucumis sativus]
          Length = 57

 Score = 45.1 bits (105), Expect(2) = 7e-06
 Identities = 20/25 (80%), Positives = 21/25 (84%)
 Frame = -1

Query: 241 TAKLEIRKYDPRVKRHVVFTEEKMK 167
           T KLE RKYDPRV RHV+FTE KMK
Sbjct: 33  TEKLEFRKYDPRVNRHVLFTEAKMK 57



 Score = 29.6 bits (65), Expect(2) = 7e-06
 Identities = 13/20 (65%), Positives = 16/20 (80%)
 Frame = -2

Query: 312 DKKKERRKLIKLVSSAGTGF 253
           DKKK+    I+LVS+AGTGF
Sbjct: 3   DKKKKATMFIRLVSAAGTGF 22


Top