BLASTX nr result

ID: Scutellaria22_contig00023967 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00023967
         (415 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003612608.1| Replication protein A 70 kDa DNA-binding sub...    63   4e-10
gb|ABD33126.2| RNA-directed DNA polymerase (Reverse transcriptas...    67   2e-09
ref|XP_002454941.1| hypothetical protein SORBIDRAFT_03g001780 [S...    65   6e-09
ref|XP_003604260.1| CNGC5-like protein [Medicago truncatula] gi|...    65   7e-09
gb|ABN08038.1| RNA-directed DNA polymerase (Reverse transcriptas...    65   7e-09

>ref|XP_003612608.1| Replication protein A 70 kDa DNA-binding subunit [Medicago
            truncatula] gi|355513943|gb|AES95566.1| Replication
            protein A 70 kDa DNA-binding subunit [Medicago
            truncatula]
          Length = 1723

 Score = 63.2 bits (152), Expect(2) = 4e-10
 Identities = 31/62 (50%), Positives = 45/62 (72%), Gaps = 2/62 (3%)
 Frame = -3

Query: 377  GRYIQNL--MFMQSLSFPEALNDTKVVLIPKCENRATLEDLRPISLCYVLYKIISKVLAD 204
            GRYI      ++ + SFP  LN T + LIPK + +++++D RPI+LC VLYKI++KVLA+
Sbjct: 902  GRYIFEAACFWLDNGSFPSCLNSTNITLIPKGDTQSSMKDWRPIALCNVLYKIVAKVLAN 961

Query: 203  RL 198
            RL
Sbjct: 962  RL 963



 Score = 25.8 bits (55), Expect(2) = 4e-10
 Identities = 13/22 (59%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
 Frame = -2

Query: 141  IQYILKTCDRFAWEYL-GIVGK 79
            IQYI    DR  WEYL  I+GK
Sbjct: 998  IQYISTAYDRINWEYLRSIMGK 1019


>gb|ABD33126.2| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
           truncatula]
          Length = 653

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 30/51 (58%), Positives = 41/51 (80%)
 Frame = -3

Query: 338 SFPEALNDTKVVLIPKCENRATLEDLRPISLCYVLYKIISKVLADRLIKLL 186
           + P AL DT +VLIPKC++  T+ DLRPISLC V+YKI++K LA+RL ++L
Sbjct: 71  NLPTALGDTNIVLIPKCDHPRTMRDLRPISLCNVVYKILAKTLANRLQRVL 121


>ref|XP_002454941.1| hypothetical protein SORBIDRAFT_03g001780 [Sorghum bicolor]
           gi|241926916|gb|EES00061.1| hypothetical protein
           SORBIDRAFT_03g001780 [Sorghum bicolor]
          Length = 631

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 33/49 (67%), Positives = 38/49 (77%)
 Frame = -3

Query: 332 PEALNDTKVVLIPKCENRATLEDLRPISLCYVLYKIISKVLADRLIKLL 186
           PE  NDT +VLIPK      L+DLRPISLC VLYK+ISKVLA+RL K+L
Sbjct: 62  PEGWNDTIIVLIPKTNTPQMLKDLRPISLCNVLYKLISKVLANRLKKIL 110


>ref|XP_003604260.1| CNGC5-like protein [Medicago truncatula]
           gi|355505315|gb|AES86457.1| CNGC5-like protein [Medicago
           truncatula]
          Length = 1023

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 27/46 (58%), Positives = 40/46 (86%)
 Frame = -3

Query: 335 FPEALNDTKVVLIPKCENRATLEDLRPISLCYVLYKIISKVLADRL 198
           FP +LN+T + LIPKC++  +++D+RPISLC VLYK++SK+LA+RL
Sbjct: 85  FPSSLNETNICLIPKCDSPKSMKDMRPISLCNVLYKMLSKLLANRL 130


>gb|ABN08038.1| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
           truncatula]
          Length = 573

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 34/56 (60%), Positives = 42/56 (75%)
 Frame = -3

Query: 353 FMQSLSFPEALNDTKVVLIPKCENRATLEDLRPISLCYVLYKIISKVLADRLIKLL 186
           ++ S SFP  LN T +VL PK +N   ++DLRPISLC VLYKIISKVLA+RL  L+
Sbjct: 34  WLTSGSFPPELNATHIVLAPKGDNPEYMKDLRPISLCNVLYKIISKVLANRLRPLI 89


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