BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00023927
         (704 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275898.2| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...   226   3e-57
ref|XP_002298071.1| RNA polymerase IV subunit [Populus trichocar...   224   2e-56
emb|CAN66198.1| hypothetical protein VITISV_011232 [Vitis vinifera]   222   5e-56
ref|XP_004147993.1| PREDICTED: DNA-directed RNA polymerase D sub...   220   2e-55
ref|XP_002509696.1| DNA-directed RNA polymerase, putative [Ricin...   204   2e-50

>ref|XP_002275898.2| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase D
           subunit 1-like [Vitis vinifera]
          Length = 1560

 Score =  226 bits (576), Expect = 3e-57
 Identities = 126/245 (51%), Positives = 160/245 (65%), Gaps = 11/245 (4%)
 Frame = +2

Query: 2   DSPSSQDQPSNCKYCTGKTKYGYPKMKFKVSTKDVFAKSAIIAEVSETLVNKSNYGG--- 172
           DS S + +   CKYC   +   YP MKFKVS+KD+F K+AII E++E L  K        
Sbjct: 147 DSGSRRLRSKGCKYCAANSNDWYPTMKFKVSSKDLFRKTAIIVEMNEKLPKKLQKKSFRP 206

Query: 173 -LASDYWDVIPKDPDQEDTNL-PNGRVLSSSQVYSILKDVSPSILQAVLKRKNSIFLNSL 346
            L  DYWD IPKDP QE+  L PN RVLS +QV+ +LKD+ P  ++  + R +S FLN L
Sbjct: 207 VLPLDYWDFIPKDPQQEENCLNPNRRVLSHAQVHYLLKDIDPGFIKEFVSRMDSFFLNCL 266

Query: 347 LVTPNSHRVREF------GQRITVDETTKMYRKLVDFRGKARELSARVLDRYKLSKLRSE 508
            VTPN+HRV E       GQ +  D+ ++ Y+KLVDFRG A ELS RVLD  K SKLRSE
Sbjct: 267 PVTPNNHRVTEITHALSNGQTLIFDQHSRAYKKLVDFRGTANELSCRVLDCLKTSKLRSE 326

Query: 509 RLSNIEKAYEKQSTNDSASSSSGLKNIKDLLLGKRTDHSFRMVVVGDPAVNVNEIGLPFH 688
                     K ++ DSAS  SGLK IK++LLGKRT+HSFRM+VVGDP + ++EIG+P H
Sbjct: 327 ----------KSTSKDSASKMSGLKWIKEVLLGKRTNHSFRMIVVGDPKLRLSEIGIPCH 376

Query: 689 IAENV 703
           IAE +
Sbjct: 377 IAEEL 381


>ref|XP_002298071.1| RNA polymerase IV subunit [Populus trichocarpa]
           gi|222845329|gb|EEE82876.1| RNA polymerase IV subunit
           [Populus trichocarpa]
          Length = 1517

 Score =  224 bits (570), Expect = 2e-56
 Identities = 121/240 (50%), Positives = 163/240 (67%), Gaps = 13/240 (5%)
 Frame = +2

Query: 23  QPSNCKYCTGKTKYGYPKMKFKVSTKDVFAKSAIIAEVSETLVNKSNYGG---LASDYWD 193
           Q   CKYC G +   YP MKFKVS+K++F K+AIIAE+ ETL  K   G    LA+DYWD
Sbjct: 148 QRKGCKYCAGNSLGWYPPMKFKVSSKEIFRKTAIIAEIRETLSKKPQKGFKKILAADYWD 207

Query: 194 VIPKDP--DQEDTNL-PNGRVLSSSQVYSILKDVSPSILQAVLKRKNSIFLNSLLVTPNS 364
           + PKD   ++E+TN  PN RVLS SQV  +LKDV P+ ++  + + ++IFLN   VTPNS
Sbjct: 208 IFPKDEQEEEEETNAKPNRRVLSHSQVRHMLKDVDPNFIKLSILKTDTIFLNCFPVTPNS 267

Query: 365 HRVREF------GQRITVDETTKMYRKLVDFRGKARELSARVLDRYKLSKLRSERLSNIE 526
           HRV E       GQR+  DE T+ Y+K+VDFRG A  LS  V+D  K SKL  ++  NI+
Sbjct: 268 HRVTEVTHAFSNGQRLIFDERTRAYKKMVDFRGVANTLSFHVMDCLKTSKLNPDKSGNID 327

Query: 527 K-AYEKQSTNDSASSSSGLKNIKDLLLGKRTDHSFRMVVVGDPAVNVNEIGLPFHIAENV 703
               + + +ND  +++SGL+ IKD++LGKR DHSFRMV+VGDP + ++EIG+P HIAE +
Sbjct: 328 PWTAQPKKSNDYVNNASGLRWIKDVVLGKRNDHSFRMVIVGDPHLQLHEIGIPCHIAERL 387


>emb|CAN66198.1| hypothetical protein VITISV_011232 [Vitis vinifera]
          Length = 1393

 Score =  222 bits (566), Expect = 5e-56
 Identities = 125/245 (51%), Positives = 160/245 (65%), Gaps = 11/245 (4%)
 Frame = +2

Query: 2   DSPSSQDQPSNCKYCTGKTKYGYPKMKFKVSTKDVFAKSAIIAEVSETLVNKSNYGG--- 172
           DS S + +   CKYC   +   YP MKFKVS+KD+F K+AII E++E L  K        
Sbjct: 114 DSGSRRLRSKGCKYCAANSNDWYPTMKFKVSSKDLFRKTAIIVEMNEKLPKKLQKKSFRP 173

Query: 173 -LASDYWDVIPKDPDQEDTNL-PNGRVLSSSQVYSILKDVSPSILQAVLKRKNSIFLNSL 346
            L  DYWD IPKDP QE+  L PN RVLS +QV+ +LKD+ P  ++  + R +S FLN L
Sbjct: 174 VLPLDYWDFIPKDPQQEENCLNPNRRVLSHAQVHYLLKDIDPGFIKEFVSRMDSFFLNCL 233

Query: 347 LVTPNSHRVREF------GQRITVDETTKMYRKLVDFRGKARELSARVLDRYKLSKLRSE 508
            VTPN+HRV E       GQ +  D+ ++ Y+KLVDFRG A ELS RVLD  K SK    
Sbjct: 234 PVTPNNHRVTEITHALSNGQTLIFDQHSRAYKKLVDFRGTANELSCRVLDCLKTSKA--- 290

Query: 509 RLSNIEKAYEKQSTNDSASSSSGLKNIKDLLLGKRTDHSFRMVVVGDPAVNVNEIGLPFH 688
             SN+    EK ++ DSAS  SGLK IK++LLGKRT+HSFRM+VVGDP + ++EIG+P H
Sbjct: 291 --SNLRS--EKSTSKDSASKMSGLKWIKEVLLGKRTNHSFRMIVVGDPKLRLSEIGIPCH 346

Query: 689 IAENV 703
           IAE +
Sbjct: 347 IAEEL 351


>ref|XP_004147993.1| PREDICTED: DNA-directed RNA polymerase D subunit 1-like [Cucumis
           sativus] gi|449494342|ref|XP_004159519.1| PREDICTED: LOW
           QUALITY PROTEIN: DNA-directed RNA polymerase D subunit
           1-like [Cucumis sativus]
          Length = 1469

 Score =  220 bits (561), Expect = 2e-55
 Identities = 120/251 (47%), Positives = 162/251 (64%), Gaps = 17/251 (6%)
 Frame = +2

Query: 2   DSPSSQDQPSNCKYCTGKTKYGYPKMKFKVSTKDVFAKSAIIAEVSETLVNKSNY----G 169
           D  S  ++P  C+YC G  K  YP M+FK+ST D+F KS I+ EV E +  K       G
Sbjct: 114 DPTSDYNRPKGCRYCFGSLKDWYPPMRFKLSTTDMFKKSMIMVEVKENMSKKYQKRVAKG 173

Query: 170 GLASDYWDVIPKDPDQEDTNL-PNGRVLSSSQVYSILKDVSPSILQAVLKRKNSIFLNSL 346
           GL SDYWD IPKD  QE++   PN ++L+ +QV+ +LKD+ P  L+  +   +S+FLNS 
Sbjct: 174 GLPSDYWDFIPKDEQQEESYCRPNRKILTHAQVHYLLKDIDPKFLKKFVPAIDSLFLNSF 233

Query: 347 LVTPNSHRVREF------GQRITVDETTKMYRKLVDFRGKARELSARVLDRYKLSKLRSE 508
            VTPNSHRV E       GQR+  DE T+ Y+K+VDFRG A EL +RVLD  K+SK    
Sbjct: 234 PVTPNSHRVTEMAHSFSNGQRLIFDERTRAYKKVVDFRGTANELGSRVLDCLKISKA--- 290

Query: 509 RLSNI------EKAYEKQSTNDSASSSSGLKNIKDLLLGKRTDHSFRMVVVGDPAVNVNE 670
            + NI         Y ++   D+A+SSSGL+ IKD++LGKR+DH FRMVVVGDP + ++E
Sbjct: 291 -IYNIFVFCLNHVNYYQKKIKDTATSSSGLRWIKDVVLGKRSDHCFRMVVVGDPNIELSE 349

Query: 671 IGLPFHIAENV 703
           IG+P H+AE +
Sbjct: 350 IGIPCHVAERL 360


>ref|XP_002509696.1| DNA-directed RNA polymerase, putative [Ricinus communis]
           gi|223549595|gb|EEF51083.1| DNA-directed RNA polymerase,
           putative [Ricinus communis]
          Length = 1475

 Score =  204 bits (518), Expect = 2e-50
 Identities = 111/224 (49%), Positives = 155/224 (69%), Gaps = 12/224 (5%)
 Frame = +2

Query: 68  YPKMKFKVSTKDVFAKSAIIAEVSETLVNKSNYGG----LASDYWDVIPKDPDQEDT-NL 232
           YP MKF VS++++F K+ IIA+ SE   NKS   G    LA+DYWD+IPKD  QE+    
Sbjct: 131 YPAMKFSVSSEEIFRKNVIIAKFSERPTNKSQKRGFKKKLAADYWDIIPKDEQQEENITR 190

Query: 233 PNGRVLSSSQVYSILKDVSPSILQAVLKRKNSIFLNSLLVTPNSHRVREF------GQRI 394
           PN RVLS +QV  +L+++ P+ ++  + +++SIFLN   VTPN HRV E       GQR+
Sbjct: 191 PNQRVLSHAQVIHLLENIDPNFIRKFVLKRDSIFLNCFSVTPNCHRVTEVTHAFSNGQRL 250

Query: 395 TVDETTKMYRKLVDFRGKARELSARVLDRYKLSKLRSER-LSNIEKAYEKQSTNDSASSS 571
             D+ T+ Y+K+VDFRG A+ELS RVLD  K SK+  ++ ++N +    ++  NDS+SSS
Sbjct: 251 VFDDRTRAYKKMVDFRGIAKELSFRVLDCLKTSKINPDKSVNNDDYMALQRKMNDSSSSS 310

Query: 572 SGLKNIKDLLLGKRTDHSFRMVVVGDPAVNVNEIGLPFHIAENV 703
           SGL+ IKD++LGKR D+SFRMVVVGDP +  +EIG+P  IAE +
Sbjct: 311 SGLRWIKDVVLGKRNDNSFRMVVVGDPNIKFSEIGIPCPIAERL 354