BLASTX nr result

ID: Scutellaria22_contig00023726 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00023726
         (517 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004140275.1| PREDICTED: pentatricopeptide repeat-containi...   140   1e-31
ref|XP_003528600.1| PREDICTED: pentatricopeptide repeat-containi...   138   4e-31
emb|CBI35582.3| unnamed protein product [Vitis vinifera]              105   5e-21
emb|CAN64573.1| hypothetical protein VITISV_010383 [Vitis vinifera]   105   5e-21
gb|ABA96976.1| pentatricopeptide, putative, expressed [Oryza sat...   100   1e-19

>ref|XP_004140275.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Cucumis sativus]
          Length = 833

 Score =  140 bits (352), Expect = 1e-31
 Identities = 76/157 (48%), Positives = 102/157 (64%)
 Frame = +2

Query: 47  TQKAHALAVVLGRLPFSVSISAALILSYATHSSHPSTLKSLFIQTLPLSRSAFLHNTLIR 226
           T++ HAL ++ G LP SVS+ A+LIL+YA    HP +  SLF QT    R+AFL NTLIR
Sbjct: 73  TKQVHALGILNGFLPRSVSLCASLILNYAKFQ-HPGSFCSLFNQTFQNCRTAFLWNTLIR 131

Query: 227 ASTVLSSGPYSKCVLDLGFSVYNDLLRATSFRPDDYTFPFVLKLCADFLCASKGLEVHGR 406
           A ++  +G +       GF  YN ++R    + DD+TFPFVLKLC+D     KG+EVHG 
Sbjct: 132 AHSIAWNGTFD------GFETYNRMVRR-GVQLDDHTFPFVLKLCSDSFDICKGMEVHGV 184

Query: 407 LIKAGLDRDVFVNNTLMLFYGSCGDLCSVEKVFDEMP 517
           + K G D DV+V NTL++ YG+CG L    ++FDEMP
Sbjct: 185 VFKLGFDTDVYVGNTLLMLYGNCGFLNDARRLFDEMP 221


>ref|XP_003528600.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Glycine max]
          Length = 813

 Score =  138 bits (348), Expect = 4e-31
 Identities = 79/157 (50%), Positives = 102/157 (64%)
 Frame = +2

Query: 47  TQKAHALAVVLGRLPFSVSISAALILSYATHSSHPSTLKSLFIQTLPLSRSAFLHNTLIR 226
           T++ HA +++ G LP SVS+ A+LIL YA+   HPS    LF  ++  SRSAFL NTLIR
Sbjct: 53  TKQVHAYSLLHGFLPRSVSLCASLILQYASFG-HPSNSLLLFQHSVAYSRSAFLWNTLIR 111

Query: 227 ASTVLSSGPYSKCVLDLGFSVYNDLLRATSFRPDDYTFPFVLKLCADFLCASKGLEVHGR 406
           A+++         V D GF  YN ++RA   +PD+ T+PFVLK+C+DF+   KG EVHG 
Sbjct: 112 ANSIAG-------VFD-GFGTYNTMVRA-GVKPDECTYPFVLKVCSDFVEVRKGREVHGV 162

Query: 407 LIKAGLDRDVFVNNTLMLFYGSCGDLCSVEKVFDEMP 517
             K G D DVFV NTL+ FYG+CG      KVFDEMP
Sbjct: 163 AFKLGFDGDVFVGNTLLAFYGNCGLFGDAMKVFDEMP 199


>emb|CBI35582.3| unnamed protein product [Vitis vinifera]
          Length = 638

 Score =  105 bits (261), Expect = 5e-21
 Identities = 55/107 (51%), Positives = 67/107 (62%)
 Frame = +2

Query: 197 SAFLHNTLIRASTVLSSGPYSKCVLDLGFSVYNDLLRATSFRPDDYTFPFVLKLCADFLC 376
           +AFL NTLIR  ++   G         G  VYN ++R    RPDD+TFPFVLK CAD   
Sbjct: 6   TAFLWNTLIRGYSIAGVGG--------GLEVYNQMVRI-GVRPDDHTFPFVLKACADAFE 56

Query: 377 ASKGLEVHGRLIKAGLDRDVFVNNTLMLFYGSCGDLCSVEKVFDEMP 517
             KG EVHG ++K G + DVFV NTL+ FYG+CG L    +VFDEMP
Sbjct: 57  VRKGREVHGSVVKLGFESDVFVGNTLLSFYGNCGGLRDAGRVFDEMP 103


>emb|CAN64573.1| hypothetical protein VITISV_010383 [Vitis vinifera]
          Length = 672

 Score =  105 bits (261), Expect = 5e-21
 Identities = 55/107 (51%), Positives = 67/107 (62%)
 Frame = +2

Query: 197 SAFLHNTLIRASTVLSSGPYSKCVLDLGFSVYNDLLRATSFRPDDYTFPFVLKLCADFLC 376
           +AFL NTLIR  ++   G         G  VYN ++R    RPDD+TFPFVLK CAD   
Sbjct: 6   TAFLWNTLIRGYSIAGVGG--------GLEVYNQMVRI-GVRPDDHTFPFVLKACADAFE 56

Query: 377 ASKGLEVHGRLIKAGLDRDVFVNNTLMLFYGSCGDLCSVEKVFDEMP 517
             KG EVHG ++K G + DVFV NTL+ FYG+CG L    +VFDEMP
Sbjct: 57  VRKGREVHGXVVKLGFESDVFVGNTLLSFYGNCGGLRDAGRVFDEMP 103


>gb|ABA96976.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 780

 Score =  100 bits (249), Expect = 1e-19
 Identities = 69/158 (43%), Positives = 90/158 (56%), Gaps = 2/158 (1%)
 Frame = +2

Query: 50  QKAHALAVVLGRLPFSVSISAALILSYATHSSHPSTLKSLFIQTLPLSRSAFLHNTLIRA 229
           ++AHA ++V G L  S+ ++ AL+LSYA  S   S    L    L L RSAFL N+L RA
Sbjct: 33  RRAHAASLVSGALATSLPLAGALLLSYAALSDLASARLVLRHHPLRL-RSAFLWNSLSRA 91

Query: 230 STVLSSGPYSKCVLDLGFSVYNDLLRATSFRPDDYTFPFVLKLCADFLCAS--KGLEVHG 403
              LSS       L     VYN +LR+ + RPDD TFPF L   A  + ++  KGLE+H 
Sbjct: 92  ---LSSASLPSEAL----RVYNLMLRS-AVRPDDRTFPFALHAAAAAVASAEDKGLELHA 143

Query: 404 RLIKAGLDRDVFVNNTLMLFYGSCGDLCSVEKVFDEMP 517
             ++ G   DVF  NTL+ FY +CG  C   +VFDEMP
Sbjct: 144 SALRRGHLADVFTGNTLVAFYAACGKACDARRVFDEMP 181


Top