BLASTX nr result

ID: Scutellaria22_contig00023410 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00023410
         (496 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003591075.1| DNA excision repair protein ERCC-1 [Medicago...    42   4e-06

>ref|XP_003591075.1| DNA excision repair protein ERCC-1 [Medicago truncatula]
           gi|355480123|gb|AES61326.1| DNA excision repair protein
           ERCC-1 [Medicago truncatula]
          Length = 401

 Score = 41.6 bits (96), Expect(2) = 4e-06
 Identities = 26/61 (42%), Positives = 36/61 (59%), Gaps = 2/61 (3%)
 Frame = -2

Query: 411 ESHKQLEGIQKQNETPFVVRIPSYEEVVESSQPKT--XXXXXXXXXXXXXFNFIKNSEFY 238
           E+ KQ   I K++ T  V+RIPSY+EV+ESSQ K+               F F+K+SEFY
Sbjct: 4   EAEKQNNSINKKSST--VIRIPSYQEVIESSQTKSTPPSLFVPSQTFSQAFAFVKSSEFY 61

Query: 237 T 235
           +
Sbjct: 62  S 62



 Score = 33.9 bits (76), Expect(2) = 4e-06
 Identities = 19/38 (50%), Positives = 24/38 (63%)
 Frame = -3

Query: 116 ATHTRQRALSEAPSTSVSSSGANRNAILVSHRQNGNPL 3
           AT+    A    P+++ S    NRNAILVS+RQ GNPL
Sbjct: 86  ATNNAPAASPNLPNSN-SQPTQNRNAILVSNRQKGNPL 122


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