BLASTX nr result

ID: Scutellaria22_contig00022553 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00022553
         (381 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276575.1| PREDICTED: pentatricopeptide repeat-containi...   137   7e-31
emb|CAN65741.1| hypothetical protein VITISV_037758 [Vitis vinifera]   136   2e-30
ref|XP_002512576.1| pentatricopeptide repeat-containing protein,...   134   8e-30
ref|XP_002329996.1| predicted protein [Populus trichocarpa] gi|2...   129   2e-28
ref|XP_002318926.1| predicted protein [Populus trichocarpa] gi|2...   129   2e-28

>ref|XP_002276575.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62590-like [Vitis vinifera]
          Length = 730

 Score =  137 bits (346), Expect = 7e-31
 Identities = 71/127 (55%), Positives = 92/127 (72%), Gaps = 6/127 (4%)
 Frame = -3

Query: 364 MAVKLSSLTLSRRIPNWASLNALFSSQSCAISLHSIQELDS-----NCTDYESKIQFLKN 200
           MAVKLSSLTLS RIP W  L A  SS SCA  + ++ E+D      N  ++E K QFL+N
Sbjct: 1   MAVKLSSLTLSSRIPKWVPLIASMSSISCANRIQAVPEIDQTKTPPNDNEFEPKFQFLRN 60

Query: 199 KLHPDSLVSALEST-DLSASIKLFKWASLQRRFSHTSDTYQVLILKLGMAGNVEEMEGFC 23
           +L PD L+  L++T DL+++IK+FKWAS Q+RF HT+DTY  +ILKLGM G +E+ME FC
Sbjct: 61  RLMPDDLIRVLDTTHDLNSAIKVFKWASRQKRFRHTADTYFRVILKLGMGGKIEDMEAFC 120

Query: 22  NAMVREK 2
           + MVREK
Sbjct: 121 SEMVREK 127


>emb|CAN65741.1| hypothetical protein VITISV_037758 [Vitis vinifera]
          Length = 730

 Score =  136 bits (342), Expect = 2e-30
 Identities = 71/127 (55%), Positives = 92/127 (72%), Gaps = 6/127 (4%)
 Frame = -3

Query: 364 MAVKLSSLTLSRRIPNWASLNALFSSQSCAISLHSIQELDS-----NCTDYESKIQFLKN 200
           MAVKLSSLTLSRRIP W  L A  SS S A  + ++ E+D      N  ++E K QFL+N
Sbjct: 1   MAVKLSSLTLSRRIPKWVPLIASMSSISSANRIQAVPEIDQTKTPPNDNEFEPKFQFLRN 60

Query: 199 KLHPDSLVSALEST-DLSASIKLFKWASLQRRFSHTSDTYQVLILKLGMAGNVEEMEGFC 23
           +L PD L+  L++T DL+++IK+FKWAS Q+RF HT+DTY  +ILKLGM G +E+ME FC
Sbjct: 61  RLMPDDLIRVLDTTHDLNSAIKVFKWASRQKRFRHTADTYFRVILKLGMGGKIEDMEAFC 120

Query: 22  NAMVREK 2
           + MVREK
Sbjct: 121 SEMVREK 127


>ref|XP_002512576.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223548537|gb|EEF50028.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 739

 Score =  134 bits (337), Expect = 8e-30
 Identities = 65/124 (52%), Positives = 92/124 (74%), Gaps = 4/124 (3%)
 Frame = -3

Query: 364 MAVKLSSLTLSRRIPNWASLNALFSSQSCAISLHSIQELDS---NCTDYESKIQFLKNKL 194
           +   LS LTLS+RI  W +LN+   S SC  S+    E+D    N TD+++KI  L+NKL
Sbjct: 12  LTAMLSPLTLSKRISRWVNLNSALFSVSCTSSIQINPEIDQSILNTTDFDAKIHILRNKL 71

Query: 193 HPDSLVSALEST-DLSASIKLFKWASLQRRFSHTSDTYQVLILKLGMAGNVEEMEGFCNA 17
           +PDSL+  L+ST D+++++K+FKWASLQ+RF+HTSDTY  +ILKLG+AGN++EMEGFC  
Sbjct: 72  YPDSLIKVLQSTSDINSAVKIFKWASLQKRFNHTSDTYFWIILKLGLAGNLKEMEGFCQN 131

Query: 16  MVRE 5
            V++
Sbjct: 132 WVKD 135


>ref|XP_002329996.1| predicted protein [Populus trichocarpa] gi|222871421|gb|EEF08552.1|
           predicted protein [Populus trichocarpa]
          Length = 725

 Score =  129 bits (325), Expect = 2e-28
 Identities = 63/121 (52%), Positives = 89/121 (73%), Gaps = 4/121 (3%)
 Frame = -3

Query: 352 LSSLTLSRRIPNWASLNALFSSQSCAISLHSIQELDSNCT---DYESKIQFLKNKLHPDS 182
           LS  T  +RIP W +L A  SS SC  ++    E++ N     D++ KIQ L+NKL+PD+
Sbjct: 2   LSPSTFLKRIPKWVNLKAFISSVSCTNTIQINPEINQNTPNFPDFDVKIQSLRNKLYPDN 61

Query: 181 LVSALEST-DLSASIKLFKWASLQRRFSHTSDTYQVLILKLGMAGNVEEMEGFCNAMVRE 5
           L+  L+ST D+++++K+FKWA+LQR+F+HT+DTY  +I KLGMAGNVEEMEGFC  MV+E
Sbjct: 62  LIKVLKSTSDVNSAVKIFKWAALQRKFNHTADTYYWIIFKLGMAGNVEEMEGFCQNMVKE 121

Query: 4   K 2
           +
Sbjct: 122 R 122


>ref|XP_002318926.1| predicted protein [Populus trichocarpa] gi|222857302|gb|EEE94849.1|
           predicted protein [Populus trichocarpa]
          Length = 724

 Score =  129 bits (324), Expect = 2e-28
 Identities = 65/121 (53%), Positives = 88/121 (72%), Gaps = 4/121 (3%)
 Frame = -3

Query: 352 LSSLTLSRRIPNWASLNALFSSQSCAISLHSIQELDSNC---TDYESKIQFLKNKLHPDS 182
           LS  TLS+ IP W +L +  SS SC  ++    E++ N    TD+++KIQ L+NKL PD 
Sbjct: 2   LSPSTLSKTIPKWLNLKSFISSVSCTNAIQINPEINQNAPNITDFDAKIQSLRNKLCPDY 61

Query: 181 LVSALEST-DLSASIKLFKWASLQRRFSHTSDTYQVLILKLGMAGNVEEMEGFCNAMVRE 5
           L+  L+ST D+++++KLFKWASLQRRF+HT DTY  +I KLGMA NVEEMEGFC  MV++
Sbjct: 62  LIKVLKSTSDINSAVKLFKWASLQRRFNHTDDTYYWIIFKLGMAENVEEMEGFCQNMVKD 121

Query: 4   K 2
           +
Sbjct: 122 R 122


Top