BLASTX nr result

ID: Scutellaria22_contig00019440 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00019440
         (257 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002517040.1| pentatricopeptide repeat-containing protein,...    83   3e-14
ref|XP_002270866.1| PREDICTED: pentatricopeptide repeat-containi...    77   1e-12
emb|CAN77435.1| hypothetical protein VITISV_017817 [Vitis vinifera]    77   2e-12
emb|CAN60969.1| hypothetical protein VITISV_033859 [Vitis vinifera]    75   7e-12
ref|XP_002282912.2| PREDICTED: pentatricopeptide repeat-containi...    74   2e-11

>ref|XP_002517040.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223543675|gb|EEF45203.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 456

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 37/84 (44%), Positives = 58/84 (69%)
 Frame = +2

Query: 5   DRFLCNTLLSVCANSGLIEYAQKVFDEMPHRDVVAYTALMDGYVRSSRAREALDLFLEMR 184
           D  + N+L++  +N G +++A +V DE PHR++V +TA++DGYVR+    + +  F +MR
Sbjct: 129 DNSVTNSLITAFSNCGCVQFAHQVLDESPHRNLVTWTAMIDGYVRNGFPVDGIKCFKKMR 188

Query: 185 AMGVLMDEVAVVCALCAVGMLGCV 256
           +MGV +DE+ VV  LCA GM G V
Sbjct: 189 SMGVKIDEITVVSVLCAAGMAGDV 212


>ref|XP_002270866.1| PREDICTED: pentatricopeptide repeat-containing protein At1g50270
           [Vitis vinifera] gi|296089231|emb|CBI39003.3| unnamed
           protein product [Vitis vinifera]
          Length = 601

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 38/81 (46%), Positives = 59/81 (72%)
 Frame = +2

Query: 5   DRFLCNTLLSVCANSGLIEYAQKVFDEMPHRDVVAYTALMDGYVRSSRAREALDLFLEMR 184
           D F+ N+L+S  A+ G ++ ++++F E   +DVV++TAL++G +R+ RA EAL+ F+EMR
Sbjct: 137 DAFVQNSLVSAFAHCGYVDCSRRLFIETAKKDVVSWTALINGCLRNGRAVEALECFVEMR 196

Query: 185 AMGVLMDEVAVVCALCAVGML 247
           + GV +DEV VV  LCA  ML
Sbjct: 197 SSGVEVDEVTVVSVLCAAAML 217



 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 31/82 (37%), Positives = 51/82 (62%)
 Frame = +2

Query: 5   DRFLCNTLLSVCANSGLIEYAQKVFDEMPHRDVVAYTALMDGYVRSSRAREALDLFLEMR 184
           D ++ + L+ + +  G  + A KVF+EMP R++V++ AL+ GYV+ +R +EAL +F EM 
Sbjct: 239 DVYVGSALVDMYSKCGYCDDAVKVFNEMPTRNLVSWGALIAGYVQCNRYKEALKVFQEMI 298

Query: 185 AMGVLMDEVAVVCALCAVGMLG 250
             G+  ++  V  AL A   LG
Sbjct: 299 IEGIEPNQSTVTSALTACAQLG 320


>emb|CAN77435.1| hypothetical protein VITISV_017817 [Vitis vinifera]
          Length = 601

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 37/81 (45%), Positives = 59/81 (72%)
 Frame = +2

Query: 5   DRFLCNTLLSVCANSGLIEYAQKVFDEMPHRDVVAYTALMDGYVRSSRAREALDLFLEMR 184
           D F+ N+L+S  A+ G ++ ++++F E   +DVV++TAL++G +R+ RA EAL+ F+EMR
Sbjct: 137 DAFVQNSLVSAFAHCGYVDCSRRLFIETAKKDVVSWTALINGCLRNGRAVEALECFVEMR 196

Query: 185 AMGVLMDEVAVVCALCAVGML 247
           + GV +DEV +V  LCA  ML
Sbjct: 197 SSGVEVDEVTIVSVLCAAAML 217



 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 31/82 (37%), Positives = 51/82 (62%)
 Frame = +2

Query: 5   DRFLCNTLLSVCANSGLIEYAQKVFDEMPHRDVVAYTALMDGYVRSSRAREALDLFLEMR 184
           D ++ + L+ + +  G  + A KVF+EMP R++V++ AL+ GYV+ +R +EAL +F EM 
Sbjct: 239 DVYVGSALVDMYSKCGYCDDAVKVFNEMPTRNLVSWGALIAGYVQCNRYKEALKVFQEMI 298

Query: 185 AMGVLMDEVAVVCALCAVGMLG 250
             G+  ++  V  AL A   LG
Sbjct: 299 IEGIEPNQSTVTSALTACAQLG 320


>emb|CAN60969.1| hypothetical protein VITISV_033859 [Vitis vinifera]
          Length = 722

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 36/68 (52%), Positives = 51/68 (75%)
 Frame = +2

Query: 47  SGLIEYAQKVFDEMPHRDVVAYTALMDGYVRSSRAREALDLFLEMRAMGVLMDEVAVVCA 226
           +G +E A++VFDEMP RDVV++T ++ GY ++ R+REAL+LF EMR +GV  DEVA+V  
Sbjct: 424 AGELELARQVFDEMPERDVVSWTVMVSGYAQAKRSREALELFREMRDVGVRPDEVAMVIV 483

Query: 227 LCAVGMLG 250
           + A   LG
Sbjct: 484 ISACTSLG 491


>ref|XP_002282912.2| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
           mitochondrial-like [Vitis vinifera]
          Length = 642

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 37/78 (47%), Positives = 53/78 (67%)
 Frame = +2

Query: 23  TLLSVCANSGLIEYAQKVFDEMPHRDVVAYTALMDGYVRSSRAREALDLFLEMRAMGVLM 202
           T++   A SGL++ A K+FDEMP +DVV + A++ GYV ++R +EAL LF EM+AM +  
Sbjct: 279 TMVVGYAQSGLLDMAWKLFDEMPDKDVVPWNAMIGGYVHANRGKEALALFNEMQAMNINP 338

Query: 203 DEVAVVCALCAVGMLGCV 256
           DEV +V  L A   LG +
Sbjct: 339 DEVTMVSCLSACSQLGAL 356



 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 26/81 (32%), Positives = 51/81 (62%)
 Frame = +2

Query: 5   DRFLCNTLLSVCANSGLIEYAQKVFDEMPHRDVVAYTALMDGYVRSSRAREALDLFLEMR 184
           D F+ N ++ +  + G ++ A+K+FD+   RD+V++ ++++GYVR   A EAL+ + EM+
Sbjct: 141 DIFVSNAVIHLLVSCGDLDGARKMFDKSCVRDLVSWNSMINGYVRRGWAYEALNFYREMK 200

Query: 185 AMGVLMDEVAVVCALCAVGML 247
             G+  DEV ++  + +   L
Sbjct: 201 VEGIKPDEVTMIGVVSSCAQL 221


Top