BLASTX nr result

ID: Scutellaria22_contig00019325 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00019325
         (343 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAC98493.1| AG-motif binding protein-3 [Nicotiana tabacum]        125   3e-27
ref|XP_002876563.1| zinc finger family protein [Arabidopsis lyra...   115   3e-24
ref|NP_191612.1| GATA transcription factor 4 [Arabidopsis thalia...   115   4e-24
emb|CBI16598.3| unnamed protein product [Vitis vinifera]              112   3e-23
gb|ADK63416.1| GATA type zinc finger protein [Brassica rapa]          111   5e-23

>dbj|BAC98493.1| AG-motif binding protein-3 [Nicotiana tabacum]
          Length = 256

 Score =  125 bits (315), Expect = 3e-27
 Identities = 61/114 (53%), Positives = 75/114 (65%)
 Frame = +2

Query: 2   SNYMDDSFTDLPANELTAAVNFHSINAAGFHGRARSKRSRPSTSAIGGNQMPGGGNLRMA 181
           SN+++DSF++ P N +T  +N  S + A FH R+RSKRSR ++S     Q P        
Sbjct: 90  SNFVEDSFSNFPTNSITGTMNLSSNSTASFHSRSRSKRSRSTSSWTSSLQNPNTTMKNKE 149

Query: 182 ESFARNCGGGTETAEMARRCTHCASEKTPQWRTGPLGPKTLCNACGVRFKSGRL 343
            S        +   ++ RRCTHCASEKTPQWRTGPLGPKTLCNACGVRFKSGRL
Sbjct: 150 ISVHTRERSSSMDDDVPRRCTHCASEKTPQWRTGPLGPKTLCNACGVRFKSGRL 203


>ref|XP_002876563.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297322401|gb|EFH52822.1| zinc finger family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 240

 Score =  115 bits (289), Expect = 3e-24
 Identities = 64/127 (50%), Positives = 74/127 (58%), Gaps = 13/127 (10%)
 Frame = +2

Query: 2   SNYMDDSFTDLPANELTAAVNFHSINAAGFHGRARSKRSRPSTSAIGGN----------- 148
           S ++DDSF+D PAN LT  V         F G+ RS+RSR    ++ G            
Sbjct: 78  SRFVDDSFSDFPANPLTMTVR----PEISFTGKPRSRRSRAPAPSVAGTWAPMPESELCH 133

Query: 149 --QMPGGGNLRMAESFARNCGGGTETAEMARRCTHCASEKTPQWRTGPLGPKTLCNACGV 322
               P    +  AES   + GGG      ARRCTHCASEKTPQWRTGPLGPKTLCNACGV
Sbjct: 134 SVAKPKPKKVYNAESITADVGGG------ARRCTHCASEKTPQWRTGPLGPKTLCNACGV 187

Query: 323 RFKSGRL 343
           R+KSGRL
Sbjct: 188 RYKSGRL 194


>ref|NP_191612.1| GATA transcription factor 4 [Arabidopsis thaliana]
           gi|62900345|sp|O49743.1|GATA4_ARATH RecName: Full=GATA
           transcription factor 4; Short=AtGATA-4
           gi|14190407|gb|AAK55684.1|AF378881_1 AT3g60530/T8B10_190
           [Arabidopsis thaliana] gi|2959736|emb|CAA74002.1|
           homologous to GATA-binding transcription factors
           [Arabidopsis thaliana] gi|7288001|emb|CAB81839.1| GATA
           transcription factor 4 [Arabidopsis thaliana]
           gi|14517395|gb|AAK62588.1| AT3g60530/T8B10_190
           [Arabidopsis thaliana] gi|15215891|gb|AAK91489.1|
           AT3g60530/T8B10_190 [Arabidopsis thaliana]
           gi|332646554|gb|AEE80075.1| GATA transcription factor 4
           [Arabidopsis thaliana]
          Length = 240

 Score =  115 bits (288), Expect = 4e-24
 Identities = 62/119 (52%), Positives = 75/119 (63%), Gaps = 5/119 (4%)
 Frame = +2

Query: 2   SNYMDDSFTDLPANELTAAVNFHSINAAGFHGRARSKRSRPSTSAIGGNQMPGGGNLRMA 181
           S ++DDSF+D PAN LT  V         F G+ RS+RSR    ++ G   P   +  + 
Sbjct: 81  SRFVDDSFSDFPANPLTMTVR----PEISFTGKPRSRRSRAPAPSVAGTWAPMSES-ELC 135

Query: 182 ESFARN-----CGGGTETAEMARRCTHCASEKTPQWRTGPLGPKTLCNACGVRFKSGRL 343
            S A+          + TA+ ARRCTHCASEKTPQWRTGPLGPKTLCNACGVR+KSGRL
Sbjct: 136 HSVAKPKPKKVYNAESVTADGARRCTHCASEKTPQWRTGPLGPKTLCNACGVRYKSGRL 194


>emb|CBI16598.3| unnamed protein product [Vitis vinifera]
          Length = 255

 Score =  112 bits (280), Expect = 3e-23
 Identities = 61/115 (53%), Positives = 75/115 (65%), Gaps = 1/115 (0%)
 Frame = +2

Query: 2   SNYMDDSFTDLPANELTAAVNFHSINAAGFHGRARSKRSRPSTSAIGGNQMPGGGNLRMA 181
           SN++DDSF D P NEL   V     ++  F GR RSKRSR S++    N++    +    
Sbjct: 83  SNFVDDSFADFPENELAGTVMARPDSS--FPGRTRSKRSRASST----NKVWTSSSSSSV 136

Query: 182 ESFARNCGGGTETAEM-ARRCTHCASEKTPQWRTGPLGPKTLCNACGVRFKSGRL 343
            S  R+      ++   AR+CTHCASEKTPQWRTGPLGPKTLCNACGVR+KSGRL
Sbjct: 137 ISGERSSSSSPASSPTGARKCTHCASEKTPQWRTGPLGPKTLCNACGVRYKSGRL 191


>gb|ADK63416.1| GATA type zinc finger protein [Brassica rapa]
          Length = 256

 Score =  111 bits (278), Expect = 5e-23
 Identities = 64/128 (50%), Positives = 79/128 (61%), Gaps = 14/128 (10%)
 Frame = +2

Query: 2   SNYMDDSFTDLPANELTAAVNFHSINAAGFHGRARSKRSRPSTSAIG--GNQMPGGGNLR 175
           S ++DDSF D PAN L   +       + F G+ RSKRS+P ++ +G          N+ 
Sbjct: 80  SQFVDDSFADFPANPLGGTMTSVKTETS-FTGKPRSKRSKPPSTLVGTWAPMSETDQNIH 138

Query: 176 MA---ESFARNCGGG-------TETAEMA--RRCTHCASEKTPQWRTGPLGPKTLCNACG 319
           +A   +    + GGG        ETAE A  RRCTHCA++KTPQWRTGPLGPKTLCNACG
Sbjct: 139 VAGRSKPKKEHSGGGGRHQSSSAETAEGAGLRRCTHCATDKTPQWRTGPLGPKTLCNACG 198

Query: 320 VRFKSGRL 343
           VRFKSGRL
Sbjct: 199 VRFKSGRL 206


Top