BLASTX nr result

ID: Scutellaria22_contig00019268 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00019268
         (570 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI20464.3| unnamed protein product [Vitis vinifera]               75   7e-12
ref|XP_002280346.1| PREDICTED: WD repeat-containing protein 25-l...    75   7e-12
ref|NP_200263.2| transducin/WD40 domain-containing protein [Arab...    71   1e-10
ref|XP_002866048.1| WD-40 repeat family protein [Arabidopsis lyr...    70   2e-10
dbj|BAC42935.1| unknown protein [Arabidopsis thaliana]                 69   4e-10

>emb|CBI20464.3| unnamed protein product [Vitis vinifera]
          Length = 506

 Score = 75.1 bits (183), Expect = 7e-12
 Identities = 43/102 (42%), Positives = 61/102 (59%), Gaps = 1/102 (0%)
 Frame = +2

Query: 104 PVLLHSDPPIPGSYVSKRQKAALSATNETPISPNPNYNAA-LSGSISDRDLPHGILTTLR 280
           P+L    P I G Y+SKR+++ LS     P+ PNP  +A+ + GSISD DLP  IL++LR
Sbjct: 127 PLLPKPYPLIAGRYISKRERSLLSPALSPPL-PNPAASASPVMGSISDSDLPRDILSSLR 185

Query: 281 RYVKGSVASNKLTTPHPLSAAMVGHTKPVNAVQWSPTHGNLI 406
              KG     +++    LS  +  H K VN +QWSPTH +L+
Sbjct: 186 HQAKGRSQLGRIS--ERLSVDLKSHKKSVNTIQWSPTHAHLL 225


>ref|XP_002280346.1| PREDICTED: WD repeat-containing protein 25-like [Vitis vinifera]
          Length = 418

 Score = 75.1 bits (183), Expect = 7e-12
 Identities = 43/102 (42%), Positives = 61/102 (59%), Gaps = 1/102 (0%)
 Frame = +2

Query: 104 PVLLHSDPPIPGSYVSKRQKAALSATNETPISPNPNYNAA-LSGSISDRDLPHGILTTLR 280
           P+L    P I G Y+SKR+++ LS     P+ PNP  +A+ + GSISD DLP  IL++LR
Sbjct: 39  PLLPKPYPLIAGRYISKRERSLLSPALSPPL-PNPAASASPVMGSISDSDLPRDILSSLR 97

Query: 281 RYVKGSVASNKLTTPHPLSAAMVGHTKPVNAVQWSPTHGNLI 406
              KG     +++    LS  +  H K VN +QWSPTH +L+
Sbjct: 98  HQAKGRSQLGRIS--ERLSVDLKSHKKSVNTIQWSPTHAHLL 137


>ref|NP_200263.2| transducin/WD40 domain-containing protein [Arabidopsis thaliana]
           gi|332009122|gb|AED96505.1| transducin/WD40
           domain-containing protein [Arabidopsis thaliana]
          Length = 457

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 36/100 (36%), Positives = 60/100 (60%), Gaps = 7/100 (7%)
 Frame = +2

Query: 128 PIPGSYVSKRQKAALSATNETP-------ISPNPNYNAALSGSISDRDLPHGILTTLRRY 286
           P+PG YVSKR+++ L++ +  P       +S  P  +  + GSISD D+P  +L+++R  
Sbjct: 79  PVPGRYVSKRERSLLASLSTIPTPDQSSDLSQKPYSSPTVLGSISDSDVPRHVLSSVRHR 138

Query: 287 VKGSVASNKLTTPHPLSAAMVGHTKPVNAVQWSPTHGNLI 406
            KGS    ++  P  +S ++ GHTK V A+ WS +H +L+
Sbjct: 139 PKGSSLQTEM--PSRMSISLTGHTKAVTAIDWSTSHVHLL 176


>ref|XP_002866048.1| WD-40 repeat family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297311883|gb|EFH42307.1| WD-40 repeat family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 455

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 42/127 (33%), Positives = 70/127 (55%), Gaps = 11/127 (8%)
 Frame = +2

Query: 92  QTRVPVLLHSDPPIPGSYVSKRQKAALSATNETP-------ISPNPNYNAALSGSISDRD 250
           QT   V +    P+PG YVSKR+++ L++ +  P       ++  P+ +  + GSISD D
Sbjct: 65  QTSSSVSVPVPVPVPGRYVSKRERSLLASVSTIPTQDQSSDLNQKPSSSPTVLGSISDSD 124

Query: 251 LPHGILTTLRRYVKGSVASNKLTTPHPLSAAMVGHTKPVNAVQWSPTHGNLI----MYSV 418
           +P  +L+++    KGS  S +   P  +S ++ GHTK V A+ WS +H +L+    + SV
Sbjct: 125 VPRHVLSSVTHRPKGS--SLRTEMPSRMSISLTGHTKAVTAIDWSTSHVHLLASAGLDSV 182

Query: 419 NLLGN*W 439
             + N W
Sbjct: 183 AYVWNVW 189


>dbj|BAC42935.1| unknown protein [Arabidopsis thaliana]
          Length = 214

 Score = 69.3 bits (168), Expect = 4e-10
 Identities = 35/96 (36%), Positives = 57/96 (59%), Gaps = 7/96 (7%)
 Frame = +2

Query: 128 PIPGSYVSKRQKAALSATNETP-------ISPNPNYNAALSGSISDRDLPHGILTTLRRY 286
           P+PG YVSKR+++ L++ +  P       +S  P  +  + GSISD D+P  +L+++R  
Sbjct: 79  PVPGRYVSKRERSLLASLSTIPTPDQSSDLSQKPYSSPTVLGSISDSDVPRHVLSSVRHR 138

Query: 287 VKGSVASNKLTTPHPLSAAMVGHTKPVNAVQWSPTH 394
            KGS    ++  P  +S ++ GHTK V A+ WS +H
Sbjct: 139 PKGSSLQTEM--PSRMSISLTGHTKAVTAIDWSTSH 172


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