BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00019251
         (882 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004138226.1| PREDICTED: DNA mismatch repair protein MSH2-...   309   e-109
ref|XP_003562321.1| PREDICTED: LOW QUALITY PROTEIN: DNA mismatch...   263   3e-96
gb|EEC78891.1| hypothetical protein OsI_19262 [Oryza sativa Indi...   266   2e-94
dbj|BAK07130.1| predicted protein [Hordeum vulgare subsp. vulgare]    263   2e-94
ref|NP_001146301.1| DNA mismatch repair protein MSH2 [Zea mays] ...   258   5e-93

>ref|XP_004138226.1| PREDICTED: DNA mismatch repair protein MSH2-like [Cucumis sativus]
           gi|449477104|ref|XP_004154930.1| PREDICTED: DNA mismatch
           repair protein MSH2-like [Cucumis sativus]
          Length = 938

 Score =  309 bits (791), Expect(2) = e-109
 Identities = 147/204 (72%), Positives = 177/204 (86%)
 Frame = -2

Query: 614 FHCKDILSHTTAVRQLGSGSDAIPSVSVSKNMFETMARDLLLERSDHTLELYEGSGANWN 435
           F  K     TTA+RQLG+ S+A+ SVSVSKNMFE++ARDLLLER+DHTLELYEGSG+NW 
Sbjct: 56  FIAKTYYRTTTALRQLGNASEALSSVSVSKNMFESIARDLLLERTDHTLELYEGSGSNWR 115

Query: 434 LVKSGSPGNLGSFEEILFANNEMQDSPAIVAVTANFRENGCTVGLGYVDLTKRVLGLAEF 255
           L+KSGSPGN+GSFE++LFANNEMQDSPAIVA+   FR+NGC VGLGYVDLTKRV+G+AEF
Sbjct: 116 LIKSGSPGNIGSFEDVLFANNEMQDSPAIVALFPYFRDNGCIVGLGYVDLTKRVMGMAEF 175

Query: 254 LDDNHFTNMESALVALGCKECLLPVEIAKSSEYKPLTDALSRCSAMVTERKKIEFKGRDL 75
           +DD+HFTN+ESALV +GCKECLLP+E  KS + KPL D L++C  M+TERKK EFK RDL
Sbjct: 176 IDDSHFTNVESALVGIGCKECLLPLESGKSGDIKPLHDVLTKCGVMLTERKKSEFKMRDL 235

Query: 74  VQDLGRLVKGSIDPVRDLLAAFEF 3
           VQDL RL+KGS++PVRDL++ FEF
Sbjct: 236 VQDLSRLIKGSVEPVRDLVSGFEF 259



 Score =  112 bits (280), Expect(2) = e-109
 Identities = 52/64 (81%), Positives = 56/64 (87%)
 Frame = -3

Query: 778 MGDNFEEQSKLPELKLDAKQAQGFLSFFKRLPKDPRAVRFFDRRDYYTVHGENATFIAKT 599
           MGDN +EQ+KLPELKLDAKQAQGFL+FFK LP D RAVRFFDRRDYYT H +NA FIAKT
Sbjct: 1   MGDNVDEQTKLPELKLDAKQAQGFLAFFKTLPPDSRAVRFFDRRDYYTAHSDNAVFIAKT 60

Query: 598 YYHT 587
           YY T
Sbjct: 61  YYRT 64


>ref|XP_003562321.1| PREDICTED: LOW QUALITY PROTEIN: DNA mismatch repair protein
           MSH2-like [Brachypodium distachyon]
          Length = 942

 Score =  263 bits (673), Expect(2) = 3e-96
 Identities = 128/197 (64%), Positives = 163/197 (82%), Gaps = 1/197 (0%)
 Frame = -2

Query: 590 HT-TAVRQLGSGSDAIPSVSVSKNMFETMARDLLLERSDHTLELYEGSGANWNLVKSGSP 414
           HT TA+RQLGS SD I SVSVS+ MFET+AR+LLLER+D TLELYEGSG++W L KSG+P
Sbjct: 65  HTMTALRQLGSNSDGISSVSVSRAMFETIARNLLLERTDCTLELYEGSGSSWRLAKSGTP 124

Query: 413 GNLGSFEEILFANNEMQDSPAIVAVTANFRENGCTVGLGYVDLTKRVLGLAEFLDDNHFT 234
           GN+GSFE+ILF NN+MQDSP  VA+    RE+   +GL +VD+T R LGLAEF +D+ FT
Sbjct: 125 GNIGSFEDILFTNNDMQDSPVTVALFPVLRESQLYIGLSFVDMTNRKLGLAEFPEDSRFT 184

Query: 233 NMESALVALGCKECLLPVEIAKSSEYKPLTDALSRCSAMVTERKKIEFKGRDLVQDLGRL 54
           N+ESALVALGCKECLLP +  K  + +PL DA+S+CS ++TERKK +FK RDLVQDLGR+
Sbjct: 185 NVESALVALGCKECLLPADFEKPIDLQPLQDAISKCSVLLTERKKADFKSRDLVQDLGRI 244

Query: 53  VKGSIDPVRDLLAAFEF 3
           ++GS++PVRDLL+ F++
Sbjct: 245 IRGSVEPVRDLLSQFDY 261



 Score =  115 bits (288), Expect(2) = 3e-96
 Identities = 53/66 (80%), Positives = 58/66 (87%)
 Frame = -3

Query: 784 VEMGDNFEEQSKLPELKLDAKQAQGFLSFFKRLPKDPRAVRFFDRRDYYTVHGENATFIA 605
           +E  D   E  KLPELKLDA+QAQGF+SFFK+LPKDPRA+RFFDRRDYYT HGENATFIA
Sbjct: 1   MEGEDYLPEGGKLPELKLDARQAQGFISFFKKLPKDPRAIRFFDRRDYYTAHGENATFIA 60

Query: 604 KTYYHT 587
           KTYYHT
Sbjct: 61  KTYYHT 66


>gb|EEC78891.1| hypothetical protein OsI_19262 [Oryza sativa Indica Group]
           gi|222630934|gb|EEE63066.1| hypothetical protein
           OsJ_17874 [Oryza sativa Japonica Group]
          Length = 942

 Score =  266 bits (680), Expect(2) = 2e-94
 Identities = 129/200 (64%), Positives = 165/200 (82%), Gaps = 1/200 (0%)
 Frame = -2

Query: 599 ILSHT-TAVRQLGSGSDAIPSVSVSKNMFETMARDLLLERSDHTLELYEGSGANWNLVKS 423
           I  HT +A+RQLGS SD + SVSVSK MFET+AR+LLLER+D TLELYEGSG++W L KS
Sbjct: 62  IYYHTMSALRQLGSNSDGLSSVSVSKTMFETIARNLLLERTDRTLELYEGSGSSWRLTKS 121

Query: 422 GSPGNLGSFEEILFANNEMQDSPAIVAVTANFRENGCTVGLGYVDLTKRVLGLAEFLDDN 243
           G+PGN+GSFE+ILFANN+MQDSP  VA+   F+E    VGL +VDLT R LGL+EF +D+
Sbjct: 122 GTPGNIGSFEDILFANNDMQDSPVTVALFPVFQEGQLYVGLSFVDLTNRKLGLSEFPEDS 181

Query: 242 HFTNMESALVALGCKECLLPVEIAKSSEYKPLTDALSRCSAMVTERKKIEFKGRDLVQDL 63
            FTN+ESALVALGCKECLLP +  KS + KPL DA++ C+ ++TERKK+EFK RDLVQDL
Sbjct: 182 RFTNVESALVALGCKECLLPADCEKSIDLKPLQDAITNCNVLLTERKKVEFKSRDLVQDL 241

Query: 62  GRLVKGSIDPVRDLLAAFEF 3
           GR+++G ++PVRDL++ F++
Sbjct: 242 GRIIRGPVEPVRDLVSQFDY 261



 Score =  107 bits (266), Expect(2) = 2e-94
 Identities = 50/64 (78%), Positives = 56/64 (87%), Gaps = 1/64 (1%)
 Frame = -3

Query: 775 GDNF-EEQSKLPELKLDAKQAQGFLSFFKRLPKDPRAVRFFDRRDYYTVHGENATFIAKT 599
           GD+F  E  KLPELKLDA+QAQGF+SFFK+LP+D RA+R FDRRDYYT HGENATFIAK 
Sbjct: 3   GDDFLPEGGKLPELKLDARQAQGFISFFKKLPQDSRAIRLFDRRDYYTAHGENATFIAKI 62

Query: 598 YYHT 587
           YYHT
Sbjct: 63  YYHT 66


>dbj|BAK07130.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 942

 Score =  263 bits (671), Expect(2) = 2e-94
 Identities = 127/197 (64%), Positives = 162/197 (82%), Gaps = 1/197 (0%)
 Frame = -2

Query: 590 HT-TAVRQLGSGSDAIPSVSVSKNMFETMARDLLLERSDHTLELYEGSGANWNLVKSGSP 414
           HT TA+RQLG  SD I SVSVS+ MFET+AR+LLL+R+DHTLELYEGSG++W L KSG+P
Sbjct: 65  HTMTALRQLGGNSDGISSVSVSRAMFETIARNLLLDRTDHTLELYEGSGSSWRLTKSGTP 124

Query: 413 GNLGSFEEILFANNEMQDSPAIVAVTANFRENGCTVGLGYVDLTKRVLGLAEFLDDNHFT 234
           GN+GSFE+ILFANN+MQ SP  VA+   FRE    V L +VD+T R LGLAEF +D+ FT
Sbjct: 125 GNIGSFEDILFANNDMQYSPVTVALFPVFREGQLYVALSFVDMTNRKLGLAEFPEDSRFT 184

Query: 233 NMESALVALGCKECLLPVEIAKSSEYKPLTDALSRCSAMVTERKKIEFKGRDLVQDLGRL 54
           N+ESALVALGCKECLLP +  KS + +PL DA+S C+ ++TERKK EFK RD+VQDLGR+
Sbjct: 185 NVESALVALGCKECLLPADFEKSIDLQPLQDAISNCNILLTERKKAEFKSRDIVQDLGRI 244

Query: 53  VKGSIDPVRDLLAAFEF 3
           ++GS++P+RDLL+ F++
Sbjct: 245 IRGSVEPIRDLLSQFDY 261



 Score =  110 bits (275), Expect(2) = 2e-94
 Identities = 50/62 (80%), Positives = 54/62 (87%)
 Frame = -3

Query: 772 DNFEEQSKLPELKLDAKQAQGFLSFFKRLPKDPRAVRFFDRRDYYTVHGENATFIAKTYY 593
           D   E  KLPELKLDA+QAQGF+SFFK+LPKDPRA+R FDRRDYYT HGENATFIAK YY
Sbjct: 5   DFLPEGGKLPELKLDARQAQGFISFFKKLPKDPRAIRLFDRRDYYTAHGENATFIAKAYY 64

Query: 592 HT 587
           HT
Sbjct: 65  HT 66


>ref|NP_001146301.1| DNA mismatch repair protein MSH2 [Zea mays]
           gi|11386957|sp|Q9XGC9.1|MSH2_MAIZE RecName: Full=DNA
           mismatch repair protein MSH2; AltName: Full=MUS1
           gi|4775576|emb|CAB42554.1| MUS1 protein [Zea mays]
           gi|414887420|tpg|DAA63434.1| TPA: DNA mismatch repair
           protein MSH2 [Zea mays]
          Length = 942

 Score =  258 bits (659), Expect(2) = 5e-93
 Identities = 125/197 (63%), Positives = 161/197 (81%), Gaps = 1/197 (0%)
 Frame = -2

Query: 590 HT-TAVRQLGSGSDAIPSVSVSKNMFETMARDLLLERSDHTLELYEGSGANWNLVKSGSP 414
           HT +A+RQLGS SD I S SVSK MFET+AR++LLER+D TLELYEGSG+NW L KSG+P
Sbjct: 65  HTMSALRQLGSSSDGILSASVSKAMFETIARNILLERTDCTLELYEGSGSNWRLTKSGTP 124

Query: 413 GNLGSFEEILFANNEMQDSPAIVAVTANFRENGCTVGLGYVDLTKRVLGLAEFLDDNHFT 234
           GN+GSFE+ILFANN+M+DSP IVA+    RE+   VGL ++D+T R LGLAEF +D+ FT
Sbjct: 125 GNIGSFEDILFANNDMEDSPVIVALFPACRESQLYVGLSFLDMTNRKLGLAEFPEDSRFT 184

Query: 233 NMESALVALGCKECLLPVEIAKSSEYKPLTDALSRCSAMVTERKKIEFKGRDLVQDLGRL 54
           N+ESALVALGCKECLLP +  KS +  PL D +S C+ ++TE+KK +FK RDL QDLGR+
Sbjct: 185 NVESALVALGCKECLLPADCEKSIDLNPLQDVISNCNVLLTEKKKADFKSRDLAQDLGRI 244

Query: 53  VKGSIDPVRDLLAAFEF 3
           ++GS++PVRDLL+ F++
Sbjct: 245 IRGSVEPVRDLLSQFDY 261



 Score =  110 bits (274), Expect(2) = 5e-93
 Identities = 51/64 (79%), Positives = 57/64 (89%), Gaps = 1/64 (1%)
 Frame = -3

Query: 775 GDNFE-EQSKLPELKLDAKQAQGFLSFFKRLPKDPRAVRFFDRRDYYTVHGENATFIAKT 599
           GD+F  E  KLPE KLDA+QAQGF+SFFK+LP+DPRAVR FDRRDYYT HGENATFIA+T
Sbjct: 3   GDDFTPEGGKLPEFKLDARQAQGFISFFKKLPQDPRAVRLFDRRDYYTAHGENATFIART 62

Query: 598 YYHT 587
           YYHT
Sbjct: 63  YYHT 66