BLASTX nr result

ID: Scutellaria22_contig00019137 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00019137
         (876 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004161095.1| PREDICTED: LOW QUALITY PROTEIN: RNA pseudour...   192   8e-47
ref|XP_004143077.1| PREDICTED: RNA pseudourine synthase 2, chlor...   192   8e-47
ref|XP_003634352.1| PREDICTED: RNA pseudourine synthase 2, chlor...   191   1e-46
emb|CAN66750.1| hypothetical protein VITISV_034413 [Vitis vinifera]   191   1e-46
ref|XP_003603819.1| RNA pseudourine synthase [Medicago truncatul...   182   9e-44

>ref|XP_004161095.1| PREDICTED: LOW QUALITY PROTEIN: RNA pseudourine synthase 2,
           chloroplastic-like [Cucumis sativus]
          Length = 452

 Score =  192 bits (488), Expect = 8e-47
 Identities = 93/127 (73%), Positives = 110/127 (86%)
 Frame = -3

Query: 874 ARHAVSRYKVIEILADGGCALVEWRLETGRTHQIRAHAKYLGIPLLGDDVYGGTKSMALS 695
           A++A SRY V+EILA GG +LVEWRLETGRTHQIRAHAKY+GIPLLGD+VYGGTKSMA+S
Sbjct: 300 AKYAASRYNVMEILAQGGSSLVEWRLETGRTHQIRAHAKYMGIPLLGDEVYGGTKSMAMS 359

Query: 694 LLQSRNSSIYHSQLRELVTRLERPCLHALTLGLRHPKTGENLSFSQMPPTDFSEILDRLR 515
           LL++R SS  H QL +LV+ LERPCLHALTLG  HP TG+N+ FS  PPTDF+EIL +LR
Sbjct: 360 LLRTRASSNCHGQLMQLVSSLERPCLHALTLGFVHPHTGKNIRFSCPPPTDFTEILSQLR 419

Query: 514 DIGTKKV 494
           +IGT+KV
Sbjct: 420 EIGTQKV 426


>ref|XP_004143077.1| PREDICTED: RNA pseudourine synthase 2, chloroplastic-like [Cucumis
           sativus]
          Length = 453

 Score =  192 bits (488), Expect = 8e-47
 Identities = 93/127 (73%), Positives = 110/127 (86%)
 Frame = -3

Query: 874 ARHAVSRYKVIEILADGGCALVEWRLETGRTHQIRAHAKYLGIPLLGDDVYGGTKSMALS 695
           A++A SRY V+EILA GG +LVEWRLETGRTHQIRAHAKY+GIPLLGD+VYGGTKSMA+S
Sbjct: 301 AKYAASRYNVMEILAQGGSSLVEWRLETGRTHQIRAHAKYMGIPLLGDEVYGGTKSMAMS 360

Query: 694 LLQSRNSSIYHSQLRELVTRLERPCLHALTLGLRHPKTGENLSFSQMPPTDFSEILDRLR 515
           LL++R SS  H QL +LV+ LERPCLHALTLG  HP TG+N+ FS  PPTDF+EIL +LR
Sbjct: 361 LLRTRASSNCHGQLMQLVSSLERPCLHALTLGFVHPHTGKNIRFSCPPPTDFTEILSQLR 420

Query: 514 DIGTKKV 494
           +IGT+KV
Sbjct: 421 EIGTQKV 427


>ref|XP_003634352.1| PREDICTED: RNA pseudourine synthase 2, chloroplastic-like [Vitis
           vinifera] gi|302141717|emb|CBI18920.3| unnamed protein
           product [Vitis vinifera]
          Length = 433

 Score =  191 bits (486), Expect = 1e-46
 Identities = 94/126 (74%), Positives = 106/126 (84%)
 Frame = -3

Query: 874 ARHAVSRYKVIEILADGGCALVEWRLETGRTHQIRAHAKYLGIPLLGDDVYGGTKSMALS 695
           ARHA SRYKVIEILA GG ALVEWRLETGRTHQIRAHAKYLGIPLLGD+VYGGTK+MALS
Sbjct: 302 ARHAASRYKVIEILAAGGSALVEWRLETGRTHQIRAHAKYLGIPLLGDEVYGGTKNMALS 361

Query: 694 LLQSRNSSIYHSQLRELVTRLERPCLHALTLGLRHPKTGENLSFSQMPPTDFSEILDRLR 515
           LL+ R  S +H QL +LV+RL+RPCLHA+ LG  HPKTG+N+ FS  PP DF+EIL  LR
Sbjct: 362 LLRPRIPSSHHGQLAQLVSRLDRPCLHAVALGFNHPKTGKNVHFSCQPPEDFAEILSWLR 421

Query: 514 DIGTKK 497
            I T+K
Sbjct: 422 KISTEK 427


>emb|CAN66750.1| hypothetical protein VITISV_034413 [Vitis vinifera]
          Length = 611

 Score =  191 bits (486), Expect = 1e-46
 Identities = 94/126 (74%), Positives = 106/126 (84%)
 Frame = -3

Query: 874 ARHAVSRYKVIEILADGGCALVEWRLETGRTHQIRAHAKYLGIPLLGDDVYGGTKSMALS 695
           ARHA SRYKVIEILA GG ALVEWRLETGRTHQIRAHAKYLGIPLLGD+VYGGTK+MALS
Sbjct: 448 ARHAASRYKVIEILAAGGSALVEWRLETGRTHQIRAHAKYLGIPLLGDEVYGGTKNMALS 507

Query: 694 LLQSRNSSIYHSQLRELVTRLERPCLHALTLGLRHPKTGENLSFSQMPPTDFSEILDRLR 515
           LL+ R  S +H QL +LV+RL+RPCLHA+ LG  HPKTG+N+ FS  PP DF+EIL  LR
Sbjct: 508 LLRPRIPSSHHGQLAQLVSRLDRPCLHAVALGFNHPKTGKNVHFSCQPPEDFAEILSWLR 567

Query: 514 DIGTKK 497
            I T+K
Sbjct: 568 KISTEK 573


>ref|XP_003603819.1| RNA pseudourine synthase [Medicago truncatula]
           gi|355492867|gb|AES74070.1| RNA pseudourine synthase
           [Medicago truncatula]
          Length = 465

 Score =  182 bits (462), Expect = 9e-44
 Identities = 86/128 (67%), Positives = 105/128 (82%)
 Frame = -3

Query: 874 ARHAVSRYKVIEILADGGCALVEWRLETGRTHQIRAHAKYLGIPLLGDDVYGGTKSMALS 695
           ARHA SRYKVIEILA G CALVEW+LETGRTHQIRAHAKYLG+PLLGD+VYGGTKSM LS
Sbjct: 327 ARHAASRYKVIEILAGGSCALVEWKLETGRTHQIRAHAKYLGVPLLGDEVYGGTKSMVLS 386

Query: 694 LLQSRNSSIYHSQLRELVTRLERPCLHALTLGLRHPKTGENLSFSQMPPTDFSEILDRLR 515
           LL+ R +   HS++ + V+ L+RPCLHA TLG +HP TGE + FS  PP DF++IL +LR
Sbjct: 387 LLRPRTTPSLHSEMFKTVSGLDRPCLHASTLGFQHPHTGEQVHFSCEPPVDFNDILSQLR 446

Query: 514 DIGTKKVT 491
            IG++ ++
Sbjct: 447 RIGSESIS 454


Top